RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 RASSF2P50749 326 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF133P52736 654 aaPredicted RBP12.32□□□□□ -0.44
VAMP4-203ENST00000474047 HGFACQ04756 655 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
VAMP4-203ENST00000474047 ETFDHQ16134 617 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 ZER1Q7Z7L7 766 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 KRTAP1-3Q8IUG1 177 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 FGFBP3Q8TAT2 258 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 REEP1Q9H902 201 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 CDH20Q9HBT6 801 aa12.32□□□□□ -0.44
VAMP4-203ENST00000474047 MAP1AP78559 2803 aaPredicted RBP12.32□□□□□ -0.44
VAMP4-203ENST00000474047 AHCYL1O43865 530 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SSX4O60224 188 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 CCNB2O95067 398 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 FOSL1P15407 271 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF26P17031 533 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 FPR3P25089 353 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 NOS3P29474 1203 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SLC6A6P31641 620 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 THBS4P35443 961 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 NUDT6P53370 316 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 KRR1Q13601 381 aaKnown RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 CLEC12BQ2HXU8 276 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SLC30A7Q8NEW0 376 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 OR1J2Q8NGS2 313 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 RASD2Q96D21 266 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 ERMAPQ96PL5 475 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 IFT27Q9BW83 186 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 C1orf198Q9H425 327 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 GDF2Q9UK05 429 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 UGT2A1Q9Y4X1 527 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 LYVE1Q9Y5Y7 322 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 HIVEP1P15822 2718 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 IGKV1D-43A0A0B4J1Z2 117 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SLC22A23A1A5C7 686 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 PRSS37A4D1T9 235 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 B9A039 149 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 GNGT2O14610 69 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SMAD7O15105 426 aaKnown RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 IGHV4-39P01824 125 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 RAP2AP10114 183 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 NR4A1P22736 598 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 APLNRP35414 380 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 MAGEA2P43356 314 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 CENPAP49450 140 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 RPS23P62266 143 aaKnown RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 FLOT2Q14254 428 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 ADIPOQQ15848 244 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 TBC1D28Q2M2D7 210 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 RFX4Q33E94 735 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 MESTQ5EB52 335 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 OR2T5Q6IEZ7 315 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 C11orf71Q6IPW1 123 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 C1orf94Q6P1W5 598 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 JAZF1Q86VZ6 243 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SPATA24Q86W54 205 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 OR2T29Q8NH02 315 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 GPA33Q99795 319 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 OR52D1Q9H346 318 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF442Q9H7R0 627 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 SAMHD1Q9Y3Z3 626 aaKnown RBP12.31□□□□□ -0.44
VAMP4-203ENST00000474047 CMAHPQ9Y471 501 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 U3KQV3 271 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 AKAP9Q99996 3911 aa12.31□□□□□ -0.44
VAMP4-203ENST00000474047 TRIM64A6NGJ6 449 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 TRIM64BA6NI03 449 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 H7C1Q1 480 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 ACOT8O14734 319 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 SLC16A7O60669 478 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 NDUFS7O75251 213 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 ATP5HO75947 161 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 PPP1R3DO95685 299 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF35P13682 527 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 MSR1P21757 451 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 LAP3P28838 519 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 HMGA2P52926 109 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 PCBD1P61457 104 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 FAM27BQ5VT28 67 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 PGBD2Q6P3X8 592 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 FAM122BQ7Z309 247 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 ADCK1Q86TW2 530 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 ALDH16A1Q8IZ83 802 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 OR52L1Q8NGH7 329 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
VAMP4-203ENST00000474047 SAMD8Q96LT4 415 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 ZNF75AQ96N20 296 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 GPX7Q96SL4 187 aaPredicted RBP12.3□□□□□ -0.44
VAMP4-203ENST00000474047 PLK3Q9H4B4 646 aa12.3□□□□□ -0.44
VAMP4-203ENST00000474047 SLC7A8Q9UHI5 535 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms