RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 IER3IP1Q9Y5U9 82 aa15.7■□□□□ 0.1
SNX4-204ENST00000473417 SONP18583 2426 aaKnown RBP15.7■□□□□ 0.1
SNX4-204ENST00000473417 ABCA1O95477 2261 aa15.7■□□□□ 0.1
SNX4-204ENST00000473417 ANK3Q12955 4377 aaKnown RBP15.69■□□□□ 0.1
SNX4-204ENST00000473417 TEX13CA0A0J9YWL9 993 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 A6NIZ1 184 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 H7C1C5 153 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 SLC2A10O95528 541 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 HOXB1P14653 301 aaPredicted RBP15.69■□□□□ 0.1
SNX4-204ENST00000473417 RAP1BP61224 184 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 LCN6P62502 163 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 RAP1AP62834 184 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 PPP2R2BQ00005 443 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 RFX4Q33E94 735 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 ZNF544Q6NX49 715 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 DPY19L2P2Q6ZN68 376 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 FAM122BQ7Z309 247 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 DEPDC4Q8N2C3 294 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 MUC15Q8N387 334 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 MAPK1IP1LQ8NDC0 245 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 OR10G2Q8NGC3 310 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 NSMAFQ92636 917 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 HTRA1Q92743 480 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 NMD3Q96D46 503 aaKnown RBP15.69■□□□□ 0.1
SNX4-204ENST00000473417 SAMD8Q96LT4 415 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 ZNF570Q96NI8 536 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 RBP7Q96R05 134 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 GPX7Q96SL4 187 aaPredicted RBP15.69■□□□□ 0.1
SNX4-204ENST00000473417 ALG12Q9BV10 488 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 CACNG6Q9BXT2 260 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 REG4Q9BYZ8 158 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 TMEM38BQ9NVV0 291 aa15.69■□□□□ 0.1
SNX4-204ENST00000473417 ALPK2Q86TB3 2170 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 IGKV1D-43A0A0B4J1Z2 117 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 ZNF503-AS2A6NEH8 195 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 TIPRLO75663 272 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 PPP1R3DO95685 299 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 HLA-HP01893 362 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 CD79AP11912 226 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 SLC6A6P31641 620 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 ZNF84P51523 738 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 CCNIQ14094 377 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 MESTQ5EB52 335 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 ZNF627Q7L945 461 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 TMEM179BQ7Z7N9 219 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 FBXL14Q8N1E6 418 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 GIPC3Q8TF64 312 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 RASD2Q96D21 266 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 EGLN3Q9H6Z9 239 aa15.68■□□□□ 0.1
SNX4-204ENST00000473417 SOCS2O14508 198 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 XKRYO14609 159 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 E2F6O75461 281 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 NR2C1P13056 603 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 SDHAP31040 664 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 FABP6P51161 128 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 RPS6KA3P51812 740 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 ZNF133P52736 654 aaPredicted RBP15.67■□□□□ 0.1
SNX4-204ENST00000473417 PIGFQ07326 219 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 KRR1Q13601 381 aaKnown RBP15.67■□□□□ 0.1
SNX4-204ENST00000473417 THEM4Q5T1C6 240 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 C10orf128Q5T292 105 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 GPR139Q6DWJ6 353 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 SLC25A47Q6Q0C1 308 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 ZNF620Q6ZNG0 422 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 MDP1Q86V88 176 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 PRIMA1Q86XR5 153 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 SKA3Q8IX90 412 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 CCDC36Q8IYA8 594 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 SLC22A24Q8N4F4 322 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 ERMAPQ96PL5 475 aaPredicted RBP15.67■□□□□ 0.1
SNX4-204ENST00000473417 IFT27Q9BW83 186 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 DNAJB9Q9UBS3 223 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 DNHD1Q96M86 4753 aa15.67■□□□□ 0.1
SNX4-204ENST00000473417 IGHV1-18A0A0C4DH31 117 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 ATP6V1G2-DDX39BF2Z307 99 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 H7C417 338 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 SSX4O60224 188 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 PATE4P0C8F1 98 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 OR8G3PP0DMU2 310 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 CBR1P16152 277 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 CDAP32320 146 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 GK3PQ14409 553 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 CLEC12AQ5QGZ9 265 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 HS3ST5Q8IZT8 346 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 FNDC8Q8TC99 324 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 SLC38A2Q96QD8 506 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 FEVQ99581 238 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 SH3GL3Q99963 347 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 SMURF2Q9HAU4 748 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 PDP1Q9P0J1 537 aaPredicted RBP15.66■□□□□ 0.1
SNX4-204ENST00000473417 UGT2A1Q9Y4X1 527 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 ATP23Q9Y6H3 246 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 CDH10Q9Y6N8 788 aa15.66■□□□□ 0.1
SNX4-204ENST00000473417 SLC22A23A1A5C7 686 aa15.65■□□□□ 0.1
SNX4-204ENST00000473417 PRSS37A4D1T9 235 aa15.65■□□□□ 0.1
SNX4-204ENST00000473417 IMPA2O14732 288 aa15.65■□□□□ 0.1
SNX4-204ENST00000473417 FARS2O95363 451 aaKnown RBP15.65■□□□□ 0.1
SNX4-204ENST00000473417 TXNDC12O95881 172 aa15.65■□□□□ 0.1
SNX4-204ENST00000473417 IGFBP1P08833 259 aaPredicted RBP15.65■□□□□ 0.1
SNX4-204ENST00000473417 CELA3BP08861 270 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms