RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OR8D4Q8NGM9 314 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 IGFBPL1Q8WX77 278 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 MUCL1Q96DR8 90 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 TEX12Q9BXU0 123 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 DGCR6LQ9BY27 220 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 GABARAPL1Q9H0R8 117 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 SEMA6AQ9H2E6 1030 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 OR52D1Q9H346 318 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 GSX1Q9H4S2 264 aaPredicted RBP11.42□□□□□ -0.58
TPM3-216ENST00000473036 EGLN3Q9H6Z9 239 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 TMEM38BQ9NVV0 291 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 CRNNQ9UBG3 495 aaPredicted RBP11.42□□□□□ -0.58
TPM3-216ENST00000473036 OAZ3Q9UMX2 235 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 PLEKHA6Q9Y2H5 1048 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 AMDHD2Q9Y303 409 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 MAGED1Q9Y5V3 778 aaPredicted RBP11.42□□□□□ -0.58
TPM3-216ENST00000473036 SVEP1Q4LDE5 3571 aa11.42□□□□□ -0.58
TPM3-216ENST00000473036 USF3Q68DE3 2245 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 TEX13CA0A0J9YWL9 993 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 CENPBD1B2RD01 187 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 M0R1B8 84 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 ATE1O95260 518 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 PPP1R3DO95685 299 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 IGLV1-44P01699 117 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 HLA-HP01893 362 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 CDAP32320 146 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 CDKN2AP42771 156 aaKnown RBP11.41□□□□□ -0.58
TPM3-216ENST00000473036 HSPA13P48723 471 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 ALDH3A2P51648 485 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 CLRN1P58418 232 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 FBXW10Q5XX13 1052 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 SMARCD3Q6STE5 483 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 ZNF813Q6ZN06 617 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 ZNF620Q6ZNG0 422 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 MDP1Q86V88 176 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 AQP11Q8NBQ7 271 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 FANK1Q8TC84 345 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 NABP1Q96AH0 204 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 SAMD8Q96LT4 415 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 FOXB1Q99853 325 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 SH3GL3Q99963 347 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 NIPSNAP1Q9BPW8 284 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 USE1Q9NZ43 259 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 POFUT2Q9Y2G5 429 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 IER3IP1Q9Y5U9 82 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 JMJD1CQ15652 2540 aa11.41□□□□□ -0.58
TPM3-216ENST00000473036 SLC22A23A1A5C7 686 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 ABCD4O14678 606 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 ARHGEF9O43307 516 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 TXNDC12O95881 172 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 INHBBP09529 407 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 CD53P19397 219 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 CALCRP30988 508 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 HOXC12P31275 282 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 RPL4P36578 427 aaKnown RBP11.4□□□□□ -0.58
TPM3-216ENST00000473036 VHLP40337 213 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 NR1H2P55055 460 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 DAG1Q14118 895 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 OGFRL1Q5TC84 451 aaPredicted RBP11.4□□□□□ -0.58
TPM3-216ENST00000473036 SHEQ5VZ18 495 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 OTPQ5XKR4 325 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 DPY19L2P2Q6ZN68 376 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 ZNF584Q8IVC4 421 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 SLC22A24Q8N4F4 322 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 NSMAFQ92636 917 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 AKAP1Q92667 903 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPM3-216ENST00000473036 GTPBP3Q969Y2 492 aaKnown RBP11.4□□□□□ -0.58
TPM3-216ENST00000473036 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 FEVQ99581 238 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 CIB1Q99828 191 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 ALG12Q9BV10 488 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 ESRP2Q9H6T0 727 aaKnown RBP11.4□□□□□ -0.58
TPM3-216ENST00000473036 UBTD1Q9HAC8 227 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 B3GAT2Q9NPZ5 323 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 ARID1AO14497 2285 aa11.4□□□□□ -0.58
TPM3-216ENST00000473036 PRSS37A4D1T9 235 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 SAC3D1A6NKF1 404 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 E7EQL1 145 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 DCTN6O00399 190 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 SOCS2O14508 198 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 HEXAP06865 529 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 CD3EP07766 207 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 CECR9P0C854 216 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 CTLA4P16410 223 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 PRKACGP22612 351 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 SDHAP31040 664 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 PTDSS1P48651 473 aaKnown RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 RPS6KA3P51812 740 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 ESRRGP62508 458 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 PIGFQ07326 219 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 CD47Q08722 323 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 KEAP1Q14145 624 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 PGGHGQ32M88 737 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 ZNF672Q499Z4 452 aaPredicted RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 ZNF362Q5T0B9 420 aaPredicted RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 FAHD1Q6P587 224 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms