RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 OR5M8Q8NGP6 311 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 RNASE11Q8TAA1 199 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 SMPDL3BQ92485 455 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 SLC25A28Q96A46 364 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ALG14Q96F25 216 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 PEX11GQ96HA9 241 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 SAMD8Q96LT4 415 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 TEAD3Q99594 435 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 OCSTAMPQ9BR26 566 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 ADAT1Q9BUB4 502 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 TMEM27Q9HBJ8 222 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 KLHL28Q9NXS3 571 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 RCC2Q9P258 522 aaKnown RBP9.17□□□□□ -0.94
APTX-216ENST00000472896 IL20RAQ9UHF4 553 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 V9GY05 133 aa9.17□□□□□ -0.94
APTX-216ENST00000472896 UNC119BA6NIH7 251 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 OR2AT4A6NND4 320 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 F8VVB4 439 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 F8VWA3 439 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 CLN5O75503 358 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 IFNA10P01566 189 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 CTSLP07711 333 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 GP1BBP13224 206 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 TPT1P13693 172 aaKnown RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 WT1P19544 449 aaPredicted RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 SRMP19623 302 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 SERPINA4P29622 427 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 PYCR1P32322 319 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 DLSTP36957 453 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 HTR5AP47898 357 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 OR12D2P58182 307 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 CD81P60033 236 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 FZD2Q14332 565 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 TBR1Q16650 682 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 LBHQ53QV2 105 aaPredicted RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 LY6G6FQ5SQ64 297 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 TMEM244Q5VVB8 128 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 NXPE4Q6UWF7 544 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 TMEM64Q6YI46 380 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 LNX2Q8N448 690 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 SLC30A7Q8NEW0 376 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 SDR9C7Q8NEX9 313 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 OR4C16Q8NGL9 310 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 SFXN5Q8TD22 340 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 STK35Q8TDR2 534 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 OR8D1Q8WZ84 308 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 EXOSC8Q96B26 276 aaKnown RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 MALSU1Q96EH3 234 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 TAAR9Q96RI9 348 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 NRIP2Q9BQI9 281 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 SLC25A21Q9BQT8 299 aaPredicted RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 ZCCHC2Q9C0B9 1178 aaKnown RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 WDR13Q9H1Z4 485 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 SEC61A2Q9H9S3 476 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 ADGRL4Q9HBW9 690 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 CMC2Q9NRP2 79 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 DHCR7Q9UBM7 475 aaKnown RBP9.16□□□□□ -0.94
APTX-216ENST00000472896 TRPC4Q9UBN4 977 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 POMT1Q9Y6A1 747 aa9.16□□□□□ -0.94
APTX-216ENST00000472896 BOD1L1Q8NFC6 3051 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 GXYLT2A0PJZ3 443 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 C9orf170A2RU37 121 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 POM121BA6NF01 834 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 FAM183AA6NL82 134 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 F5H0A9 414 aaPredicted RBP9.15□□□□□ -0.94
APTX-216ENST00000472896 AP4M1O00189 453 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 SAP18O00422 153 aaKnown RBP9.15□□□□□ -0.94
APTX-216ENST00000472896 TXNL1O43396 289 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 RCBTB2O95199 551 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 IGSF6O95976 241 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 ACTL6AO96019 429 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 ITGB2P05107 769 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 HLA-GP17693 338 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 BMP7P18075 431 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 CDK2P24941 298 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 AKT2P31751 481 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 CASRP41180 1078 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 TLE1Q04724 770 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 HSPB3Q12988 150 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 INPP5JQ15735 1006 aaPredicted RBP9.15□□□□□ -0.94
APTX-216ENST00000472896 DEFB133Q30KQ1 61 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 PCGF3Q3KNV8 242 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 FAM46CQ5VWP2 391 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 Q6ZVU0 165 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 MEX3DQ86XN8 651 aaKnown RBP9.15□□□□□ -0.94
APTX-216ENST00000472896 SLC43A2Q8N370 569 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 ARL14Q8N4G2 192 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 INO80EQ8NBZ0 244 aaPredicted RBP9.15□□□□□ -0.94
APTX-216ENST00000472896 STEAP2Q8NFT2 490 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 OR5J2Q8NH18 312 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 TMEM159Q96B96 161 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 MOAP1Q96BY2 351 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 TM4SF18Q96CE8 201 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 SAT2Q96F10 170 aaPredicted RBP9.15□□□□□ -0.94
APTX-216ENST00000472896 ZNF75AQ96N20 296 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 DERL3Q96Q80 235 aa9.15□□□□□ -0.94
APTX-216ENST00000472896 DUSP23Q9BVJ7 150 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms