RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 MSANTD1Q6ZTZ1 278 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SPATA21Q7Z572 469 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 CROCCP2Q86T23 111 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 RIMKLAQ8IXN7 391 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 RNF152Q8N8N0 203 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SCAIQ8N9R8 606 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 WDR31Q8NA23 367 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 NOA1Q8NC60 698 aaKnown RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 ADPRHL1Q8NDY3 354 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SEMA6DQ8NFY4 1073 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 OR2T11Q8NH01 316 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 MFSD8Q8NHS3 518 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SCARB1Q8WTV0 552 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 UBLCP1Q8WVY7 318 aaPredicted RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 DNAJA4Q8WW22 397 aaPredicted RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 CKAP2Q8WWK9 683 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 XAGE5Q8WWM1 108 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 LRTOMTQ8WZ04 291 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 RDH5Q92781 318 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SLC38A4Q969I6 547 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 MRPL24Q96A35 216 aaKnown RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 R3HDM4Q96D70 268 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 CCDC115Q96NT0 180 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 FOXN4Q96NZ1 517 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 PANX1Q96RD7 426 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SNX18Q96RF0 628 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 NPAS1Q99742 590 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SLC35A5Q9BS91 424 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 C1orf50Q9BV19 199 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 MECRQ9BV79 373 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 GATA5Q9BWX5 397 aaPredicted RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 LRMDAQ9H2I8 198 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 OR51I1Q9H343 314 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 TUBB1Q9H4B7 451 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 METTL17Q9H7H0 456 aaPredicted RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 RMND5AQ9H871 391 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 NOX3Q9HBY0 568 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 CRLF2Q9HC73 371 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 CYSLTR2Q9NS75 346 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SLC7A10Q9NS82 523 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 HIF1ANQ9NWT6 349 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 ADPRHL2Q9NX46 363 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SLCO1C1Q9NYB5 712 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 STX18Q9P2W9 335 aaKnown RBP3.01□□□□□ -1.93
XRN1-209ENST00000472625 RPS6KB2Q9UBS0 482 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 BTNL2Q9UIR0 455 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 OSGIN1Q9UJX0 560 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 SLC13A4Q9UKG4 626 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 CORO2BQ9UQ03 480 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 IFT52Q9Y366 437 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 PTGDR2Q9Y5Y4 395 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 MED12Q93074 2177 aa3.01□□□□□ -1.93
XRN1-209ENST00000472625 TRRAPQ9Y4A5 3859 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PPIAL4EA0A075B759 164 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PPIAL4CA0A0B4J2A2 164 aa3□□□□□ -1.93
XRN1-209ENST00000472625 IGHV2OR16-5A0A0B4J2B6 119 aa3□□□□□ -1.93
XRN1-209ENST00000472625 A0A0G2JPF8 293 aa3□□□□□ -1.93
XRN1-209ENST00000472625 LOC102725191A0A1B0GVB3 256 aa3□□□□□ -1.93
XRN1-209ENST00000472625 A0A1W2PR80 420 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PLSCR5A0PG75 271 aa3□□□□□ -1.93
XRN1-209ENST00000472625 TMEM72A0PK05 275 aa3□□□□□ -1.93
XRN1-209ENST00000472625 TMEM89A2RUT3 159 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PRORSD1PA6NEY8 169 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SMIM23A6NLE4 172 aa3□□□□□ -1.93
XRN1-209ENST00000472625 TRPC5OSA6NMA1 111 aa3□□□□□ -1.93
XRN1-209ENST00000472625 HNRNPCL2B2RXH8 293 aa3□□□□□ -1.93
XRN1-209ENST00000472625 HNRNPCL3B7ZW38 293 aa3□□□□□ -1.93
XRN1-209ENST00000472625 C5orf58C9J3I9 102 aa3□□□□□ -1.93
XRN1-209ENST00000472625 CLDN25C9JDP6 229 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PPIAL4DF5H284 164 aa3□□□□□ -1.93
XRN1-209ENST00000472625 H3BSA7 217 aa3□□□□□ -1.93
XRN1-209ENST00000472625 HMGN4O00479 90 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RFXANKO14593 260 aa3□□□□□ -1.93
XRN1-209ENST00000472625 AP3D1O14617 1153 aa3□□□□□ -1.93
XRN1-209ENST00000472625 KLF11O14901 512 aa3□□□□□ -1.93
XRN1-209ENST00000472625 TM9SF1O15321 606 aa3□□□□□ -1.93
XRN1-209ENST00000472625 BIRC5O15392 142 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SPRY2O43597 315 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RRP9O43818 475 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 HNRNPCL1O60812 293 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 AKR7A3O95154 331 aa3□□□□□ -1.93
XRN1-209ENST00000472625 NXPH3O95157 252 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ANP32DO95626 131 aa3□□□□□ -1.93
XRN1-209ENST00000472625 LGI1O95970 557 aa3□□□□□ -1.93
XRN1-209ENST00000472625 MT-ATP6P00846 226 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SERPINE1P05121 402 aa3□□□□□ -1.93
XRN1-209ENST00000472625 IL6P05231 212 aa3□□□□□ -1.93
XRN1-209ENST00000472625 CHRNGP07510 517 aa3□□□□□ -1.93
XRN1-209ENST00000472625 HNRNPCL4P0DMR1 293 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PPIAL4FP0DN26 164 aa3□□□□□ -1.93
XRN1-209ENST00000472625 IDO1P14902 403 aa3□□□□□ -1.93
XRN1-209ENST00000472625 NQO1P15559 274 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 LBPP18428 481 aa3□□□□□ -1.93
XRN1-209ENST00000472625 CCNA2P20248 432 aa3□□□□□ -1.93
XRN1-209ENST00000472625 EFNA1P20827 205 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 PTNP21246 168 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RPS4Y1P22090 263 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 PPIBP23284 216 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 CPT2P23786 658 aa3□□□□□ -1.93
XRN1-209ENST00000472625 EDNRAP25101 427 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms