RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RNFT2Q96EX2 444 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 WDR76Q9H967 626 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 MRPL22Q9NWU5 206 aaKnown RBP16.89■□□□□ 0.29
PSPC1-203ENST00000471658 MALT1Q9UDY8 824 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 MYO7BQ6PIF6 2116 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 SLC22A31A6NKX4 558 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF587BE7ETH6 402 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 RPL36A-HNRNPH2H7BZ11 118 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 HLA-DQA2P01906 255 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 GAAP10253 952 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 CD8BP10966 210 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 LAP3P28838 519 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 OPRM1P35372 400 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 MTNR1AP48039 350 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ARF1P84077 181 aaKnown RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF474Q6S9Z5 364 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 GLB1L2Q8IW92 636 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 RELL2Q8NC24 303 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 OR51G2Q8NGK0 314 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 CCDC120Q96HB5 630 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF629Q9UEG4 869 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 WARS2Q9UGM6 360 aaKnown RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 CHD6Q8TD26 2715 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 SELENOFO60613 162 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 IL18BPO95998 194 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ITGA5P08648 1049 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ADRA2AP08913 450 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 PSKH1P11801 424 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 NR2C1P13056 603 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 IGHV1-2P23083 117 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 NAA10P41227 235 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 RPS27P42677 84 aaKnown RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 SLC15A1P46059 708 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF84P51523 738 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 HCCSP53701 268 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 PIGFQ07326 219 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 ESPL1Q14674 2120 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 TSC22D1Q15714 1073 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 SGCAQ16586 387 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 SLC26A10Q8NG04 563 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 OR4F15Q8NGB8 312 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 C11orf40Q8WZ69 217 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 LGALS12Q96DT0 336 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 EMC7Q9NPA0 242 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 PLCXD1Q9NUJ7 323 aa16.88■□□□□ 0.29
PSPC1-203ENST00000471658 PAK1IP1Q9NWT1 392 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 RPL36Q9Y3U8 105 aaKnown RBP16.88■□□□□ 0.29
PSPC1-203ENST00000471658 A0A1B0GUH1 482 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 PTGES3LE9PB15 166 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 CRHBPP24387 322 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 CXCR4P61073 352 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 MVKQ03426 396 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 HSF2Q03933 536 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 GLO1Q04760 184 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 Q6ZT83 130 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 FOXL2NBQ6ZUU3 175 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 ERI1Q8IV48 349 aaKnown RBP16.87■□□□□ 0.29
PSPC1-203ENST00000471658 TIGD4Q8IY51 512 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 GABRG1Q8N1C3 465 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 NABP1Q96AH0 204 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 FOXB1Q99853 325 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 ADGRL4Q9HBW9 690 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 POLE4Q9NR33 117 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 PSORS1C1Q9UIG5 152 aa16.87■□□□□ 0.29
PSPC1-203ENST00000471658 EEF1E1-BLOC1S5C9J1V9 151 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 EEF1E1O43324 174 aaKnown RBP16.86■□□□□ 0.29
PSPC1-203ENST00000471658 B4GALT1P15291 398 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 MPGP29372 298 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 RBM48Q5RL73 367 aaKnown RBP16.86■□□□□ 0.29
PSPC1-203ENST00000471658 LCN1P1Q5VSP4 162 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF540Q8NDQ6 660 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 TMEM38BQ9NVV0 291 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 HAO2Q9NYQ3 351 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 MYRFQ9Y2G1 1151 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 COMMD3-BMI1R4GMX3 469 aa16.86■□□□□ 0.29
PSPC1-203ENST00000471658 A0A096LPE4 126 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 A0A1W2PPZ6 126 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 SNTNA6NMZ2 147 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 A8MXE2 369 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF99A8MXY4 864 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 DVL2O14641 736 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 LYZL6O75951 148 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 SBK2P0C263 348 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 CCDC159P0C7I6 412 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 CHN2P52757 468 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 CDSNQ15517 529 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 C4orf17Q53FE4 359 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 KLHL24Q6TFL4 600 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF813Q6ZN06 617 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 AHSA2Q719I0 299 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 CXorf67Q86X51 503 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 LRRC18Q8N456 261 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 OR52I1Q8NGK6 324 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 SH3GL3Q99963 347 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 PIGMQ9H3S5 423 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 MARCH7Q9H992 704 aa16.85■□□□□ 0.29
PSPC1-203ENST00000471658 MRPS18AQ9NVS2 196 aaKnown RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 ZNF593O00488 134 aaPredicted RBP16.85■□□□□ 0.29
PSPC1-203ENST00000471658 MSTNO14793 375 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms