RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 C5orf58C9J3I9 102 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 MCIDASD6RGH6 385 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 DHHO43323 396 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NPHS1O60500 1241 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 SPAG7O75391 227 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CLPXO76031 633 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 TOX4O94842 621 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 KRT75O95678 551 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CYB5R3P00387 301 aaPredicted RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 FGF4P08620 206 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 ABHD2P08910 425 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CDAP32320 146 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CRHR1P34998 444 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 PITPNBP48739 271 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 ARHGDIAP52565 204 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 PROK1P58294 105 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 DSTNP60981 165 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 PPP1CBP62140 327 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 ERVK-25P63136 954 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 LRRC74AQ0VAA2 488 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CASP8Q14790 479 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 SGCAQ16586 387 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NSUN5P1Q3KNT7 163 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NRN1LQ496H8 165 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM155Q4W5P6 130 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 MTX3Q5HYI7 312 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 SAMD5Q5TGI4 173 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 RNF220Q5VTB9 566 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 FAM205BPQ63HN1 556 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 C1orf94Q6P1W5 598 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 UNQ6126/PRO20091Q6UXV3 157 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 WDR88Q6ZMY6 472 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 RNF165Q6ZSG1 346 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 Q6ZSV7 163 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 RFPL4BQ6ZWI9 263 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 SLC35D2Q76EJ3 337 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 TRMT10CQ7L0Y3 403 aaKnown RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NLRC3Q7RTR2 1065 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NET1Q7Z628 596 aaPredicted RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 LRRC28Q86X40 367 aaPredicted RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NUDCD3Q8IVD9 361 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 OR5AS1Q8N127 324 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 C17orf53Q8N3J3 647 aaPredicted RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 OR8J2Q8NGG1 315 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 OR8B3Q8NGG8 313 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 UBLCP1Q8WVY7 318 aaPredicted RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 GATAD2BQ8WXI9 593 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 LHX4Q969G2 390 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM19Q96HH6 336 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 MOGAT1Q96PD6 335 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 OR8B2Q96RD0 313 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 OR52E6Q96RD3 313 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 EPYCQ99645 322 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 SPATA9Q9BWV2 254 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NUF2Q9BZD4 464 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 AKTIPQ9H8T0 292 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 NECAP2Q9NVZ3 263 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CALML5Q9NZT1 146 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 KLHL14Q9P2G3 628 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 DNAJB11Q9UBS4 358 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 CLN8Q9UBY8 286 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 ANGPT4Q9Y264 503 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 FAM96BQ9Y3D0 163 aa5.75□□□□□ -1.49
HDAC1-204ENST00000471488 TET2Q6N021 2002 aaPredicted RBP5.75□□□□□ -1.49
HDAC1-204ENST00000471488 IGKV1D-42A0A075B6H8 117 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 A0A0U1RQK1 487 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 LOC100653049A0A140TA62 436 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 A0A1W2PRD5 423 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 A0A1W2PRF3 423 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 A0A1W2PRM7 423 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 WDR91A4D1P6 747 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 A8MXK9 166 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 E9PBE3 544 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 KPNA4O00629 521 aaPredicted RBP5.74□□□□□ -1.49
HDAC1-204ENST00000471488 PLPP3O14495 311 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 FZD7O75084 574 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 KRT34O76011 436 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 SNAP29O95721 258 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 OPN1MWP04001 364 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 HIST1H2ABP04908 130 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 OPN1MW2P0DN77 364 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 OPN1MW3P0DN78 364 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF32P17041 273 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 LIPAP38571 399 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 WNT5AP41221 380 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 CLNS1AP54105 237 aaKnown RBP5.74□□□□□ -1.49
HDAC1-204ENST00000471488 TUSC1Q2TAM9 212 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 TMEM255AQ5JRV8 349 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 ZBTB37Q5TC79 503 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 AP1ARQ63HQ0 302 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 C5orf46Q6UWT4 87 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 GDPGP1Q6ZNW5 385 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 HIST3H2AQ7L7L0 130 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 ZNF627Q7L945 461 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 PXKQ7Z7A4 578 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 BOLLQ8N9W6 283 aaKnown RBP5.74□□□□□ -1.49
HDAC1-204ENST00000471488 C19orf18Q8NEA5 215 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 OR10AD1Q8NGE0 317 aa5.74□□□□□ -1.49
HDAC1-204ENST00000471488 EPS8L3Q8TE67 593 aaKnown RBP5.74□□□□□ -1.49
HDAC1-204ENST00000471488 MZB1Q8WU39 189 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms