RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DEPDC4Q8N2C3 294 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 ADPRHL1Q8NDY3 354 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 OR52L1Q8NGH7 329 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 OR5J2Q8NH18 312 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 OR52N5Q8NH56 324 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 CYGBQ8WWM9 190 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 APH1AQ96BI3 265 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 SLC25A36Q96CQ1 311 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 ZHX1-C8orf76Q96EF9 292 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 MUS81Q96NY9 551 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 MBOAT4Q96T53 435 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 PITX2Q99697 317 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 SHARPINQ9H0F6 387 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 OR52D1Q9H346 318 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 Q9H521 79 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 SLC25A19Q9HC21 320 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 FAM118AQ9NWS6 357 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 ASB6Q9NWX5 421 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 HIF3AQ9Y2N7 669 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 NOSIPQ9Y314 301 aaKnown RBP7.92□□□□□ -1.14
SF3A1-206ENST00000471037 PLCE1Q9P212 2302 aa7.92□□□□□ -1.14
SF3A1-206ENST00000471037 NBEAL1Q6ZS30 2694 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 TRAV27A0A087WT01 109 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 LOC100130705A0A1B0GUX0 176 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 CIB4A0PJX0 185 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 ZAR1LA6NP61 321 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 VWC2LB2RUY7 222 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 E9PQ18 207 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 M0R082 166 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 NDUFS8O00217 210 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 LMX1BO60663 402 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 NDUFB2O95178 105 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 OR6A2O95222 327 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 SOX14O95416 240 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 IGHV3-9P01782 118 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 ITGA5P08648 1049 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 USF1P22415 310 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 POU1F1P28069 291 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 SLC6A6P31641 620 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 NTF4P34130 210 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 GZMKP49863 264 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 FABP6P51161 128 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 OR2B6P58173 313 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 ADARB1P78563 741 aaKnown RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 PMS2P3Q13401 168 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 IL18R1Q13478 541 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 FHL1Q13642 323 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 SLC27A4Q6P1M0 643 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 PAQR6Q6TCH4 344 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 H1FNTQ75WM6 255 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 UBE2J2Q8N2K1 259 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 C17orf78Q8N4C9 275 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 LRRC17Q8N6Y2 441 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 C1orf162Q8NEQ5 155 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 OR51A7Q8NH64 312 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF417Q8TAU3 575 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 HTRA1Q92743 480 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 TFAP2CQ92754 450 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 HRASLS5Q96KN8 279 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 GPX7Q96SL4 187 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 ZNF587Q96SQ5 575 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 NAA11Q9BSU3 229 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-206ENST00000471037 C19orf24Q9BVV8 132 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 TEX12Q9BXU0 123 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 PRRG3Q9BZD7 231 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 EGLN3Q9H6Z9 239 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 TBC1D23Q9NUY8 699 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 BAIAP2Q9UQB8 552 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 LRRC42Q9Y546 428 aa7.91□□□□□ -1.14
SF3A1-206ENST00000471037 SVEP1Q4LDE5 3571 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 ALPK2Q86TB3 2170 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 YLPM1P49750 1951 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 A0A1W2PR80 420 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 NPIPB13A6NJU9 1138 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 AQP7P3A6NL99 342 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 NPIPB4C9JG80 1138 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 BLOC1S5-TXNDC5H3BN57 136 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 M0R1B8 84 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 PLPP3O14495 311 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 MRPL33O75394 65 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 VAMP5O95183 116 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 APEHP13798 732 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 ACADSP16219 412 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 SRD5A1P18405 259 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 EPHA2P29317 976 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 APOBEC3AP31941 199 aaPredicted RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 GGT2P36268 569 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 RPL4P36578 427 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 POLR2IP36954 125 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 AQP2P41181 271 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 GIPRP48546 466 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 FOXG1P55316 489 aaPredicted RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 FXYD6P3P58550 94 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 H3F3AP84243 136 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 CDK5Q00535 292 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 RPL18Q07020 188 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 PUDPQ08623 228 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 ZP4Q12836 540 aa7.9□□□□□ -1.14
SF3A1-206ENST00000471037 PTGES3Q15185 160 aaKnown RBP7.9□□□□□ -1.14
SF3A1-206ENST00000471037 ALG10Q5BKT4 473 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms