RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PRR30Q53SZ7 412 aaPredicted RBP8.64□□□□□ -1.03
CCM2-204ENST00000470837 C10orf128Q5T292 105 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 RNLSQ5VYX0 342 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 KCTD18Q6PI47 426 aaPredicted RBP8.64□□□□□ -1.03
CCM2-204ENST00000470837 SLC25A47Q6Q0C1 308 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 ZNF367Q7RTV3 350 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 GPR141Q7Z602 305 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 LHFPL3Q86UP9 236 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 GCNT2Q8N0V5 402 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 ZNF454Q8N9F8 522 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 OR6K3Q8NGY3 331 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 THEM6Q8WUY1 208 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 SGCDQ92629 289 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 FOXN4Q96NZ1 517 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 ALKBH3Q96Q83 286 aaPredicted RBP8.64□□□□□ -1.03
CCM2-204ENST00000470837 TTYH2Q9BSA4 534 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 ALG8Q9BVK2 526 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 NELFAQ9H3P2 528 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 WDR76Q9H967 626 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 ACOT13Q9NPJ3 140 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 BATF3Q9NR55 127 aa8.64□□□□□ -1.03
CCM2-204ENST00000470837 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
CCM2-204ENST00000470837 CAB39Q9Y376 341 aaPredicted RBP8.64□□□□□ -1.03
CCM2-204ENST00000470837 TNRC6AQ8NDV7 1962 aaKnown RBP8.64□□□□□ -1.03
CCM2-204ENST00000470837 CFAP47Q6ZTR5 3102 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 A0A1W2PQL4 384 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 TMEM129A0AVI4 362 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 ZNF99A8MXY4 864 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 UPK3AO75631 287 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 WISP2O76076 250 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 IGHV3-9P01782 118 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 MT-ND5P03915 603 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 KRT8P05787 483 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 HTR1AP08908 422 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 TMIGD3P0DMS9 266 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 TIMP3P35625 211 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 MAP2K4P45985 399 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 ETV1P50549 477 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 SH3BGRP55822 239 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 WNT4P56705 351 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 PCBD1P61457 104 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 TGFBR3Q03167 851 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 EIF2B1Q14232 305 aaKnown RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 GALEQ14376 348 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 SPHARQ15513 63 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 TAF13Q15543 124 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 STK11Q15831 433 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 CEACAM16Q2WEN9 425 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 LINC01590Q5TEZ4 76 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 TSPO2Q5TGU0 170 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 FBXW9Q5XUX1 488 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 TMEM211Q6ICI0 200 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 ZNF544Q6NX49 715 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 LRFN4Q6PJG9 635 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 PLEKHG7Q6ZR37 379 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 DPY19L4Q7Z388 723 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 FGD2Q7Z6J4 655 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 TIGD4Q8IY51 512 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 C9orf106Q8NAJ2 232 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 ST6GALNAC3Q8NDV1 305 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 SLC26A10Q8NG04 563 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 OR52N1Q8NH53 320 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 HAVCR2Q8TDQ0 301 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 C11orf40Q8WZ69 217 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 NMD3Q96D46 503 aaKnown RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 FOXB1Q99853 325 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 JAM3Q9BX67 310 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 MROQ9BYG7 248 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 GPR35Q9HC97 309 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 POLE4Q9NR33 117 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 ERVK13-1Q9NX77 482 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 SH3BGRL2Q9UJC5 107 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 ING1Q9UK53 422 aaPredicted RBP8.63□□□□□ -1.03
CCM2-204ENST00000470837 IKZF2Q9UKS7 526 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 PROCRQ9UNN8 238 aa8.63□□□□□ -1.03
CCM2-204ENST00000470837 TRGV8A0A0C4DH27 118 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 CCDC160A6NGH7 325 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 HSPB2A8KAH6 182 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 J3QLW9 94 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
CCM2-204ENST00000470837 GPANK1O95872 356 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 OR8G3PP0DMU2 310 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 GAAP10253 952 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 ZNF19P17023 458 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 HOXC12P31275 282 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 CDAP32320 146 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 OPRM1P35372 400 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 OR3A2P47893 321 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 ZNF133P52736 654 aaPredicted RBP8.62□□□□□ -1.03
CCM2-204ENST00000470837 GBX2P52951 348 aaPredicted RBP8.62□□□□□ -1.03
CCM2-204ENST00000470837 TAS2R43P59537 309 aa8.62□□□□□ -1.03
CCM2-204ENST00000470837 LSM6P62312 80 aaKnown RBP8.62□□□□□ -1.03
CCM2-204ENST00000470837 MRPS34P82930 218 aaKnown RBP8.62□□□□□ -1.03
CCM2-204ENST00000470837 EGR3Q06889 387 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms