RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CSF2RBP32927 897 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 BLKP51451 505 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 DEFA5Q01523 94 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 MC2RQ01718 297 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 SCRN3Q0VDG4 424 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 EIF3IQ13347 325 aaKnown RBP8.69□□□□□ -1.02
HDAC3-205ENST00000469550 PRRT3Q5FWE3 981 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF684Q5T5D7 378 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 DCAF12L2Q5VW00 463 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 ZCCHC12Q6PEW1 402 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 STAC2Q6ZMT1 411 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 ARL14Q8N4G2 192 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 KCNRGQ8N5I3 272 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 OR4C16Q8NGL9 310 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 SLC25A18Q9H1K4 315 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 TCEAL2Q9H3H9 227 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-205ENST00000469550 PIGMQ9H3S5 423 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 SAV1Q9H4B6 383 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-205ENST00000469550 POLE3Q9NRF9 147 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 DUSP22Q9NRW4 184 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 TAS2R3Q9NYW6 316 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 HEATR5BQ9P2D3 2071 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 COL6A6A6NMZ7 2263 aa8.69□□□□□ -1.02
HDAC3-205ENST00000469550 RAB19A4D1S5 217 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 K7ENP7 123 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 KLK10O43240 276 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 OR2F2O95006 317 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ZFPL1O95159 310 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 PMS2P2O95744 297 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 IFI6P09912 130 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 AKAIN1P0CW23 69 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 RPS15P62841 145 aaKnown RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 SORDQ00796 357 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 OR2F1Q13607 317 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 GRM7Q14831 915 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 MICBQ29980 383 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 PCGF3Q3KNV8 242 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 Q499Y3 187 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 DCST2Q5T1A1 773 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 LPCAT3Q6P1A2 487 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 INO80CQ6PI98 192 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 USP53Q70EK8 1073 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 LURAP1LQ8IV03 231 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 BPIFCQ8NFQ6 507 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 OR4K14Q8NGD5 310 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 CCDC107Q8WV48 283 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TNFAIP8L1Q8WVP5 186 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 RGP1Q92546 391 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 INSM2Q96T92 566 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 STACQ99469 402 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 MACROD1Q9BQ69 325 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 CCDC3Q9BQI4 270 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 SLC19A3Q9BZV2 496 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TCF7L1Q9HCS4 588 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 APMAPQ9HDC9 416 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 MBNL1Q9NR56 388 aaKnown RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 KCNE5Q9UJ90 142 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 MRTO4Q9UKD2 239 aaKnown RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 C19orf53Q9UNZ5 99 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 KIF26BQ2KJY2 2108 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 SMG1Q96Q15 3661 aaKnown RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TRAV14DV4A0A0A6YYC5 116 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TRBV5-5A0A0J9YX44 114 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TMEM272A0A1B0GTI8 110 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ARPC3O15145 178 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ATG12O94817 140 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 RASGRP1O95267 797 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 RLN1P04808 185 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TACSTD2P09758 323 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 SLC25A4P12235 298 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 HIST1H1CP16403 213 aaKnown RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 PSMB10P40306 273 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 CLDN12P56749 244 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 CDK3Q00526 305 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TNFRSF17Q02223 184 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 OC90Q02509 493 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 NFATC4Q14934 902 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ELOCQ15369 112 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ALG11Q2TAA5 492 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 FHL5Q5TD97 284 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF425Q6IV72 752 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ANKRD16Q6P6B7 361 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF546Q86UE3 836 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 LRRTM1Q86UE6 522 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 CDRT4Q8N9R6 151 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 OR2L3Q8NG85 312 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 GAL3ST3Q96A11 431 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 RNF166Q96A37 237 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 SMAD5Q99717 465 aaKnown RBP8.68□□□□□ -1.02
HDAC3-205ENST00000469550 UQCC2Q9BRT2 126 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 TTTY10Q9BZA0 68 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 NMNAT2Q9BZQ4 307 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 SEMA4CQ9C0C4 833 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 UPB1Q9UBR1 384 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 EPHA6Q9UF33 1036 aa8.68□□□□□ -1.02
HDAC3-205ENST00000469550 A0A087WV62 115 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ZNF432O94892 652 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 STATHP02808 62 aa8.67□□□□□ -1.02
HDAC3-205ENST00000469550 ITGB2P05107 769 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms