RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PCSK6P29122 969 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 CX3CR1P49238 355 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 ACKR1Q16570 336 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 EXOSC6Q5RKV6 272 aaKnown RBP13.76□□□□□ -0.21
LIMS2-213ENST00000469300 Q7L0L9 218 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 SLCO5A1Q9H2Y9 848 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 SLC25A19Q9HC21 320 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 PLCXD1Q9NUJ7 323 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 GFOD1Q9NXC2 390 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 ARPC5O15511 151 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 CYB5BO43169 146 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 IFNA1P01562 189 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 NKX6-1P78426 367 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 JMJD6Q6NYC1 403 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 DHRS13Q6UX07 377 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 FCRLAQ7L513 359 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 LINC00346Q8IVM7 164 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 OR2L13Q8N349 312 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 EXD3Q8N9H8 876 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 C11orf40Q8WZ69 217 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 MIB2Q96AX9 1013 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 ERVMER34-1Q9H9K5 563 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 MRPS28Q9Y2Q9 187 aaKnown RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 NAT1P18440 290 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 ARR3P36575 388 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 LUMP51884 338 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 DOK3Q7L591 496 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SULF2Q8IWU5 870 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SVBPQ8N300 66 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 LIPHQ8WWY8 451 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 ZNF764Q96H86 408 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 PLAC1Q9HBJ0 212 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SHROOM3Q8TF72 1996 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 hCG_1809904A0A1W2PP81 198 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 A0A1W2PR64 198 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 A0A1W2PRV1 198 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 ANKUB1A6NFN9 424 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 RNF212BA8MTL3 300 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SEC14L2O76054 403 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 IFNA10P01566 189 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 RAF1P04049 648 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 IFNA4P05014 189 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 DIO1P49895 249 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 EGLN1Q9GZT9 426 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 TXNIPQ9H3M7 391 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 IGHV5-51A0A0C4DH38 117 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 A0A1B0GTQ1 180 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 CTSVO60911 334 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SLC22A5O76082 557 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 CD53P19397 219 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 TBXA2RP21731 343 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 CHRNB4P30926 498 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 TNFSF8P32971 234 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 DSCR4P56555 118 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 TMEM185AQ8NFB2 350 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 OR1L3Q8NH93 324 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 SLC38A1Q9H2H9 487 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-213ENST00000469300 UGT2A1Q9Y4X1 527 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 PCDHGA5Q9Y5G8 931 aa13.75□□□□□ -0.21
LIMS2-213ENST00000469300 PRSS44E7EML9 344 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 TFP02787 698 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 JUNBP17275 347 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-213ENST00000469300 EMP3P54852 163 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 ZNF687Q8N1G0 1237 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 RPL3LQ92901 407 aaKnown RBP13.74□□□□□ -0.21
LIMS2-213ENST00000469300 DEFB127Q9H1M4 99 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 B3GNT2Q9NY97 397 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 FBXO4Q9UKT5 387 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 MPPED1O15442 326 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 HPGDSO60760 199 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 FUCA1P04066 466 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 PLGLAQ15195 96 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 ZNF425Q6IV72 752 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 CPEB3Q8NE35 698 aaKnown RBP13.74□□□□□ -0.21
LIMS2-213ENST00000469300 OR5B12Q96R08 314 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 FAM173AQ9BQD7 235 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 NUDT9Q9BW91 350 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 OR51J1Q9H342 316 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 CTSFQ9UBX1 484 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 PCOLCE2Q9UKZ9 415 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 R4GN57 208 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 CCDC163A0A0D9SF12 145 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 ZAR1LA6NP61 321 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 PRAMEF4O60810 478 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
LIMS2-213ENST00000469300 CLN3Q13286 438 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 VHLLQ6RSH7 139 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 B3GLCTQ6Y288 498 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 TXNL4BQ9NX01 149 aaKnown RBP13.74□□□□□ -0.21
LIMS2-213ENST00000469300 GABRA2P47869 451 aa13.74□□□□□ -0.21
LIMS2-213ENST00000469300 SSPNQ14714 243 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms