RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 MED29Q9NX70 200 aa8.35□□□□□ -1.07
SMC1A-205ENST00000469129 ANKRD10Q9NXR5 420 aa8.35□□□□□ -1.07
SMC1A-205ENST00000469129 IL17BQ9UHF5 180 aa8.35□□□□□ -1.07
SMC1A-205ENST00000469129 MRM2Q9UI43 246 aaKnown RBP8.35□□□□□ -1.07
SMC1A-205ENST00000469129 KLHDC2Q9Y2U9 406 aa8.35□□□□□ -1.07
SMC1A-205ENST00000469129 A0A0G2JMM0 328 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 A0A1W2PPB8 328 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 A0A1W2PRS3 328 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 SLC35F4A4IF30 521 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 OR5H15A6NDH6 313 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 KIR3DP1A8MWS1 328 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 ZNF593O00488 134 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 ZNF254O75437 659 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 UPK1BO75841 260 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 ADRB1P08588 477 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 UCHL1P09936 223 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 CLEC2LP0C7M8 214 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 POU3F2P20265 443 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 ENPP1P22413 925 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 PTBP1P26599 531 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 LAP3P28838 519 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 SHC1P29353 583 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 CD96P40200 585 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 PSMB10P40306 273 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 CCR9P51686 369 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 SOX8P57073 446 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 B3GALT5-AS1P59052 145 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 FMODQ06828 376 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 DBPQ10586 325 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 PCK2Q16822 640 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 HSD17B12Q53GQ0 312 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 AGAP7PQ5VUJ5 663 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 LIPNQ5VXI9 398 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 DEGS2Q6QHC5 323 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 ZNF227Q86WZ6 799 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 KDM8Q8N371 416 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 GALNT16Q8N428 558 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 FAM83FQ8NEG4 500 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 RELTQ969Z4 430 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 INTS12Q96CB8 462 aaKnown RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 AGAP4Q96P64 663 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 DCLRE1CQ96SD1 692 aaKnown RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 MRPL13Q9BYD1 178 aaKnown RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 SLITRK2Q9H156 845 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 TIGARQ9NQ88 270 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 MRPL22Q9NWU5 206 aaKnown RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 QPCTLQ9NXS2 382 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 PLEKHB1Q9UF11 243 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 COA3Q9Y2R0 106 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-205ENST00000469129 POLR1DQ9Y2S0 133 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 NCOR2Q9Y618 2525 aa8.34□□□□□ -1.07
SMC1A-205ENST00000469129 A0A1W2PPL8 197 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 ARGFXA6NJG6 315 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 KLRC4-KLRK1H3BQV0 150 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 ACOT7O00154 380 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 EIF1AYO14602 144 aaKnown RBP8.33□□□□□ -1.08
SMC1A-205ENST00000469129 LRRTM2O43300 516 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 NME2P1O60361 137 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 UPK3AO75631 287 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 TRAPPC6AO75865 159 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 NEURL1O76050 574 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 RPP14O95059 124 aaKnown RBP8.33□□□□□ -1.08
SMC1A-205ENST00000469129 WDPCPO95876 746 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 HPNP05981 417 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 CD46P15529 392 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 RAB3BP20337 219 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 NME2P22392 152 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 TNFSF8P32971 234 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 CSNK1A1P48729 337 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 AGFG1P52594 562 aaKnown RBP8.33□□□□□ -1.08
SMC1A-205ENST00000469129 CLDN17P56750 224 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 DEFA1P59665 94 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 DEFA3P59666 94 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 RAC3P60763 192 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 H3F3AP84243 136 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 FOXK1P85037 733 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 C19orf57Q0VDD7 668 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 MFAP5Q13361 173 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 SLC17A1Q14916 467 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 MEP1BQ16820 701 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 Q499Y3 187 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 METAP1DQ6UB28 335 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-205ENST00000469129 NHLRC1Q6VVB1 395 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 TMPRSS7Q7RTY8 843 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 YRDCQ86U90 279 aaKnown RBP8.33□□□□□ -1.08
SMC1A-205ENST00000469129 LAX1Q8IWV1 398 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 PARP16Q8N5Y8 322 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 TMEM178AQ8NBL3 297 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 OR9K2Q8NGE7 335 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 OR2V1Q8NHB1 315 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 RNF128Q8TEB7 428 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 CHPT1Q8WUD6 406 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 CPNE4Q96A23 557 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-205ENST00000469129 TXNDC15Q96J42 360 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 C4orf45Q96LM5 186 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 DCBLD2Q96PD2 775 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 MRI1Q9BV20 369 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms