RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZMIZ1Q9ULJ6 1067 aa11.24□□□□□ -0.61
USP11-206ENST00000469080 MPZL2O60487 215 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 HLA-DQB1P01920 261 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 AKR1C3P42330 323 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 PSMA6P60900 246 aaKnown RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 THEM4Q5T1C6 240 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 DHRS7BQ6IAN0 325 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 OR52W1Q6IF63 320 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 HEPHL1Q6MZM0 1159 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 METAP1DQ6UB28 335 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 CBLN3Q6UW01 205 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 WDR88Q6ZMY6 472 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 OR10J5Q8NHC4 309 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 SENP5Q96HI0 755 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 ZNF681Q96N22 645 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 PITX2Q99697 317 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 MAN2C1Q9NTJ4 1040 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 POT1Q9NUX5 634 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 ADAM29Q9UKF5 820 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 CHST2Q9Y4C5 530 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 COL4A4P53420 1690 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 TSTD3H0UI37 97 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 SUSD5O60279 629 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 CD3GP09693 182 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 ABCD3P28288 659 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 CLDN12P56749 244 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 RNF165Q6ZSG1 346 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 MED25Q71SY5 747 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 POLDIP3Q9BY77 421 aaKnown RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 GPR61Q9BZJ8 451 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 GABARAPL1Q9H0R8 117 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 SLC25A18Q9H1K4 315 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 TMEM231Q9H6L2 316 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 TMEM184BQ9Y519 407 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 TMEM218A2RU14 115 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 SLC25A12O75746 678 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 TXNDC12O95881 172 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 PMP2P02689 132 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 ANXA2P07355 339 aaKnown RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 RAB4AP20338 218 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 CARD18P57730 90 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 OR12D2P58182 307 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 OR2B8PP59922 312 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 DMWDQ09019 674 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 SFRP4Q6FHJ7 346 aaPredicted RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 LANCL3Q6ZV70 420 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 THEM6Q8WUY1 208 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 KCNJ15Q99712 375 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 ASF1BQ9NVP2 202 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 ZNF69Q9UC07 566 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 KCNE5Q9UJ90 142 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 CES1P1Q9UKY3 287 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 FLVCR2Q9UPI3 526 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 KIF26BQ2KJY2 2108 aa11.23□□□□□ -0.61
USP11-206ENST00000469080 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
USP11-206ENST00000469080 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 A6NCN8 305 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 IDSB3KWA1 339 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 PDGFBP01127 241 aaPredicted RBP11.22□□□□□ -0.61
USP11-206ENST00000469080 MT-ND4P03905 459 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 SEMG1P04279 462 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 CD1CP29017 333 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 PGGHGQ32M88 737 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 C3orf38Q5JPI3 329 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 MRM1Q6IN84 353 aaKnown RBP11.22□□□□□ -0.61
USP11-206ENST00000469080 ESPNLQ6ZVH7 1005 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 OR5M1Q8NGP8 315 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 OSTF1Q92882 214 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 WDR89Q96FK6 387 aaPredicted RBP11.22□□□□□ -0.61
USP11-206ENST00000469080 TRIM2Q9C040 744 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 OR10A5Q9H207 317 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 SIRT7Q9NRC8 400 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 KIR2DS5A0A0G2JLQ3 304 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 A0A0G2JNG1 304 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 KIR2DS3K7RE56 304 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 MASP2O00187 686 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 OR6A2O95222 327 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 ZNF44P15621 663 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 GSTM3P21266 225 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 HTR2AP28223 471 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 AQP2P41181 271 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 KIR2DS5Q14953 304 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 GSG1Q2KHT4 349 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 RAB12Q6IQ22 244 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 TAPBPLQ9BX59 468 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 TCF7L1Q9HCS4 588 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 SERTM1A2A2V5 107 aa11.22□□□□□ -0.61
USP11-206ENST00000469080 SCDO00767 359 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms