RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 ARR3P36575 388 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CRISP1P54107 249 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 KRTAP10-9P60411 292 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 BSPH1Q075Z2 132 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS13D-204ENST00000469054 GINS1Q14691 196 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 SGCAQ16586 387 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 PGGHGQ32M88 737 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF362Q5T0B9 420 aaPredicted RBP10.42□□□□□ -0.74
VPS13D-204ENST00000469054 FAM27BQ5VT28 67 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 SLC27A4Q6P1M0 643 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 TMEM108Q6UXF1 575 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 FOXL2NBQ6ZUU3 175 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 DPPA2Q7Z7J5 298 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 MDP1Q86V88 176 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CDC20BQ86Y33 519 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 OR6V1Q8N148 313 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 PQLC1Q8N2U9 271 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 IQCF1Q8N6M8 205 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 SDR9C7Q8NEX9 313 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 HTRA1Q92743 480 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 STMN2Q93045 179 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 NABP1Q96AH0 204 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 TSSK2Q96PF2 358 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 DDOQ99489 341 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 SH3GL3Q99963 347 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 OSBPL10Q9BXB5 764 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 NUAK2Q9H093 628 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 SEC61A2Q9H9S3 476 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 KRT84Q9NSB2 600 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 KLHL21Q9UJP4 597 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 B9D1Q9UPM9 204 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 COA3Q9Y2R0 106 aaPredicted RBP10.42□□□□□ -0.74
VPS13D-204ENST00000469054 A0A1W2PPL8 197 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 A0A1W2PPR1 153 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 DCTN6O00399 190 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 BAG2O95816 211 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 IFNGP01579 166 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 IGLV1-44P01699 117 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 PATE4P0C8F1 98 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 LAP3P28838 519 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 GRK5P34947 590 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 ESRRGP62508 458 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RAB1AP62820 205 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 PPP2R2BQ00005 443 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 CDK5Q00535 292 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 PIGFQ07326 219 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 GSG1Q2KHT4 349 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 C3orf36Q3SXR2 165 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 SLC36A2Q495M3 483 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 ACSM5Q6NUN0 579 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 DNM1P34Q6PK57 102 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 SLC16A14Q7RTX9 510 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 GLB1L2Q8IW92 636 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 LRRC18Q8N456 261 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 SLC37A3Q8NCC5 494 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 FGFBP3Q8TAT2 258 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 SLC38A2Q96QD8 506 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RBM4BQ9BQ04 359 aaKnown RBP10.41□□□□□ -0.74
VPS13D-204ENST00000469054 TMEM204Q9BSN7 226 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RBM4Q9BWF3 364 aaKnown RBP10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RACGAP1Q9H0H5 632 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 KCNN2Q9H2S1 579 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RERGLQ9H628 205 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 PLEKHF2Q9H8W4 249 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 SRA1Q9HD15 236 aaKnown RBP10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RPRD1BQ9NQG5 326 aaKnown RBP10.41□□□□□ -0.74
VPS13D-204ENST00000469054 POLE4Q9NR33 117 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 CMC2Q9NRP2 79 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 TMEFF2Q9UIK5 374 aaPredicted RBP10.41□□□□□ -0.74
VPS13D-204ENST00000469054 RNF115Q9Y4L5 304 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 FKBP7Q9Y680 259 aa10.41□□□□□ -0.74
VPS13D-204ENST00000469054 FLNBO75369 2602 aaKnown RBP10.41□□□□□ -0.74
VPS13D-204ENST00000469054 IGHV1-18A0A0C4DH31 117 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 RIIAD1A6NNX1 92 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ABCD4O14678 606 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 PLAUP00749 431 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 HMGN1P05114 100 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 SCG5P05408 212 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF3P17036 446 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 MSR1P21757 451 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 IGFBP5P24593 272 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 PTDSS1P48651 473 aaKnown RBP10.4□□□□□ -0.74
VPS13D-204ENST00000469054 IDH3GP51553 393 aaPredicted RBP10.4□□□□□ -0.74
VPS13D-204ENST00000469054 NPRL3Q12980 569 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 CRMP1Q14194 572 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 TMEM236Q5W0B7 351 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF704Q6ZNC4 412 aaPredicted RBP10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ZBTB46Q86UZ6 589 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 CYB561A3Q8NBI2 242 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 RADILQ96JH8 1075 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF75AQ96N20 296 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 CIB1Q99828 191 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 TEX12Q9BXU0 123 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 FN3KQ9H479 309 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 RNF121Q9H920 327 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 NOX3Q9HBY0 568 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 SLC25A19Q9HC21 320 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ENOPH1Q9UHY7 261 aa10.4□□□□□ -0.74
VPS13D-204ENST00000469054 ASH1LQ9NR48 2969 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms