RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 NTN4Q9HB63 628 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 CRLF2Q9HC73 371 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 GPR35Q9HC97 309 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 MED29Q9NX70 200 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 USE1Q9NZ43 259 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 VSX1Q9NZR4 365 aaPredicted RBP3.09□□□□□ -1.91
TRIM59-202ENST00000468542 CRNNQ9UBG3 495 aaPredicted RBP3.09□□□□□ -1.91
TRIM59-202ENST00000468542 GRHPRQ9UBQ7 328 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 UPB1Q9UBR1 384 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 ATPIF1Q9UII2 106 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 CLEC4AQ9UMR7 237 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 EDARQ9UNE0 448 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 POFUT2Q9Y2G5 429 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 U3KQV3 271 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 V9GYQ6 96 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 PRRC2AP48634 2157 aaKnown RBP3.09□□□□□ -1.91
TRIM59-202ENST00000468542 RTTNQ86VV8 2226 aa3.09□□□□□ -1.91
TRIM59-202ENST00000468542 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.91
TRIM59-202ENST00000468542 AKAP6Q13023 2319 aa3.09□□□□□ -1.92
TRIM59-202ENST00000468542 CREBBPQ92793 2442 aa3.09□□□□□ -1.92
TRIM59-202ENST00000468542 FLNAP21333 2647 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ARFGEF3Q5TH69 2177 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TEX13CA0A0J9YWL9 993 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 CIB4A0PJX0 185 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 SLC22A23A1A5C7 686 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 A6NNC1 897 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 DEFB108AA8MXU0 73 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 C11orf98E9PRG8 122 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 G3V2T6 193 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 C19orf84I3L1E1 186 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ICMTO60725 284 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 UPK3AO75631 287 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TRMUO75648 421 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TIPRLO75663 272 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 RAD51DO75771 328 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 UBL3O95164 117 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 SNAP29O95721 258 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 PTHP01270 115 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 IFNGP01579 166 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 IGLV1-44P01699 117 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 HMGN1P05114 100 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ALPLP05186 524 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 QDPRP09417 244 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 OSMP13725 252 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 CBR1P16152 277 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 CDH2P19022 906 aaPredicted RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TUBG1P23258 451 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 EDNRAP25101 427 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 GUCA1AP43080 201 aaPredicted RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 GIPRP48546 466 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ZNF84P51523 738 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 CLRN1P58418 232 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 UBE2NP61088 152 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 PCBD1P61457 104 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 LSM6P62312 80 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 PPP2R2BQ00005 443 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 IL1RL1Q01638 556 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 GLO1Q04760 184 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 FAPQ12884 760 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KRR1Q13601 381 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KPNB1Q14974 876 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 PPA1Q15181 289 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TAB1Q15750 504 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KCNMB1Q16558 191 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 CEACAM16Q2WEN9 425 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TBRG1Q3YBR2 411 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 SLC36A2Q495M3 483 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 MESTQ5EB52 335 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KDM4DQ6B0I6 523 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 SLC27A4Q6P1M0 643 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 LRFN4Q6PJG9 635 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 SLC25A47Q6Q0C1 308 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KLHL17Q6TDP4 642 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KLHL24Q6TFL4 600 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 MEX3BQ6ZN04 569 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ZBTB46Q86UZ6 589 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 JAZF1Q86VZ6 243 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 C1orf174Q8IYL3 243 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 PQLC1Q8N2U9 271 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 KDM8Q8N371 416 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 PACRGLQ8N7B6 248 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ATG16L2Q8NAA4 619 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 OR9Q2Q8NGE9 314 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 OR1K1Q8NGR3 316 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 OR2T4Q8NH00 348 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 MOSPD2Q8NHP6 518 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TEX47Q8TBZ9 253 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 HDAC2Q92769 488 aaKnown RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 BCL2L2Q92843 193 aaPredicted RBP3.08□□□□□ -1.92
TRIM59-202ENST00000468542 MCHR2Q969V1 340 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TXNDC15Q96J42 360 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 ZNF570Q96NI8 536 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 RDH12Q96NR8 316 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 WFIKKN1Q96NZ8 548 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 TSPAN32Q96QS1 320 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 DDOQ99489 341 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 C9orf16Q9BUW7 83 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 IFT27Q9BW83 186 aa3.08□□□□□ -1.92
TRIM59-202ENST00000468542 GABARAPL3Q9BY60 117 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms