RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MSR1P21757 451 aa12.55□□□□□ -0.4
BRAT1-203ENST00000467558 VEGFCP49767 419 aa12.55□□□□□ -0.4
BRAT1-203ENST00000467558 IL13RA1P78552 427 aa12.55□□□□□ -0.4
BRAT1-203ENST00000467558 OR4D9Q8NGE8 314 aa12.55□□□□□ -0.4
BRAT1-203ENST00000467558 CBX7O95931 251 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 QDPRP09417 244 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 IL32P24001 234 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 DEFA5Q01523 94 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 EGR3Q06889 387 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 CDK5R1Q15078 307 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
BRAT1-203ENST00000467558 Q6ZNX1 250 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 LANCL3Q6ZV70 420 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ELMOD2Q8IZ81 293 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 PLSCR5A0PG75 271 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ANKUB1A6NFN9 424 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 FAM166BA8MTA8 275 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 IMPA2O14732 288 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 PEX14O75381 377 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 IGHV4-34P06331 123 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 S100A6P06703 90 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF44P15621 663 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 POU3F3P20264 500 aaPredicted RBP12.54□□□□□ -0.4
BRAT1-203ENST00000467558 AKR1C2P52895 323 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 PPA1Q15181 289 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF74Q16587 644 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 DND1Q8IYX4 353 aaKnown RBP12.54□□□□□ -0.4
BRAT1-203ENST00000467558 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF845Q96IR2 970 aaPredicted RBP12.54□□□□□ -0.4
BRAT1-203ENST00000467558 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 SLC22A11Q9NSA0 550 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 DNAJB12Q9NXW2 375 aaKnown RBP12.54□□□□□ -0.4
BRAT1-203ENST00000467558 LOC100289279A0A1B0GTE1 492 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 TNFRSF10AO00220 468 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 DOK2O60496 412 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 CBR3O75828 277 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.54□□□□□ -0.4
BRAT1-203ENST00000467558 HYAL4Q2M3T9 481 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 FAM76BQ5HYJ3 339 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 AGAP7PQ5VUJ5 663 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF767PQ75MW2 155 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 OR6V1Q8N148 313 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 PLPP7Q8NBV4 271 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 DEDD2Q8WXF8 326 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 UCK1Q9HA47 277 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 MED29Q9NX70 200 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
BRAT1-203ENST00000467558 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 OR7C1O76099 320 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ATG12O94817 140 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 CT62P0C5K7 136 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 BCKDHBP21953 392 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SNRPD2P62316 118 aaKnown RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 FABP5Q01469 135 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 RHBDD2Q6NTF9 364 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 OR4Q3Q8NH05 313 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 TAAR9Q96RI9 348 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 AHCTF1Q8WYP5 2266 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 RAC2P15153 192 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 RBPJQ06330 500 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ACTBL2Q562R1 376 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 OR1J2Q8NGS2 313 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ZBTB8AQ96BR9 441 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SLAMF6Q96DU3 332 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ELMOD3Q96FG2 381 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 CMSS1Q9BQ75 279 aaKnown RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 MENTQ9BUN1 341 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SELENOIQ9C0D9 397 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 MMP25Q9NPA2 562 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 FBXO34Q9NWN3 711 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 CHST2Q9Y4C5 530 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ARPC3O15145 178 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SGCEO43556 437 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 STK17BO94768 372 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 TNFSF15O95150 251 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 UBBP0CG47 229 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 LAP3P28838 519 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 TAS2R46P59540 309 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 FOXF1Q12946 379 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ADGRE4PQ86SQ3 457 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 BEST4Q8NFU0 473 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 OIT3Q8WWZ8 545 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF486Q96H40 463 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 NICN1Q9BSH3 213 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms