RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 COPZ2Q9P299 210 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 LRRC37AA6NMS7 1700 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 TGOLN2O43493 480 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 RCBTB2O95199 551 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 TSPAN13O95857 204 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 ATP1B2P14415 290 aaPredicted RBP6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 DEFA6Q01524 100 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 EMX2Q04743 252 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 GRB14Q14449 540 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 HNF4GQ14541 408 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 VPS26BQ4G0F5 336 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 PLET1Q6UQ28 207 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 PIM3Q86V86 326 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 XYLT1Q86Y38 959 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 OR10W1Q8NGF6 305 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 OR52E4Q8NGH9 312 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 OR52E5Q8NH55 327 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 C2CD4CQ8TF44 421 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 SLC39A8Q9C0K1 460 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 DNAJC4Q9NNZ3 241 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 RBFOX1Q9NWB1 397 aaKnown RBP6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 IRAK3Q9Y616 596 aa6.91□□□□□ -1.3
SPTBN1-204ENST00000467371 A0A1B0GVI7 797 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 ASPDHA6ND91 283 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 M0R036 132 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 CT62P0C5K7 136 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 ANXA3P12429 323 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 GPD1P21695 349 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 CRYBB2P43320 205 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 PDLIM4P50479 330 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 RAG2P55895 527 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 DLK1P80370 383 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 LGALSLQ3ZCW2 172 aaPredicted RBP6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 RABL3Q5HYI8 236 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 FAM46CQ5VWP2 391 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 TRNP1Q6NT89 227 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 TMEM179BQ7Z7N9 219 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 STX19Q8N4C7 294 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 OR11H4Q8NGC9 324 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 OR8D4Q8NGM9 314 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 FCAMRQ8WWV6 532 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 TCEAL3Q969E4 200 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 VSTM2LQ96N03 204 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 TMEM209Q96SK2 561 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 MRPL57Q9BQC6 102 aaKnown RBP6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 DPH7Q9BTV6 452 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 GAREM1Q9H706 876 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 TRIM36Q9NQ86 728 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 ARL15Q9NXU5 204 aa6.9□□□□□ -1.3
SPTBN1-204ENST00000467371 hCG_38984A0A1B0GV85 526 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 IQCMA0A1B0GVH7 501 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 CASTOR2A6NHX0 329 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 SGCEO43556 437 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 CHST1O43916 411 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 FAM20BO75063 409 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 CEACAM4O75871 244 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 AQP8O94778 261 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 CFDP00746 253 aaPredicted RBP6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 IFNA21P01568 189 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 C9P02748 559 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 DCTP40126 519 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 ZFP36L2P47974 494 aaKnown RBP6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 RRADP55042 308 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 TLE3Q04726 772 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 SRSF6Q13247 344 aaKnown RBP6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 OR4D1Q15615 310 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 BICRALQ6AI39 1079 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 TTLL10Q6ZVT0 673 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 BOLLQ8N9W6 283 aaKnown RBP6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 OR4K2Q8NGD2 314 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 OR2T4Q8NH00 348 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 ITFG1Q8TB96 612 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 UPRTQ96BW1 309 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 CCDC126Q96EE4 140 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 Q96M66 194 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 CCDC115Q96NT0 180 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 GPR22Q99680 433 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 DPCDQ9BVM2 203 aaPredicted RBP6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 BARHL1Q9BZE3 327 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 ARL5AQ9Y689 179 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 HTTP42858 3142 aa6.9□□□□□ -1.31
SPTBN1-204ENST00000467371 E9PLN8 166 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 KPNA3O00505 521 aaPredicted RBP6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 EEDO75530 441 aaKnown RBP6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 CYB5R3P00387 301 aaPredicted RBP6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 LALBAP00709 142 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 CSN3P07498 182 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 VPREB1P12018 145 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 MAP2K3P46734 347 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 ACLYP53396 1101 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 RPS7P62081 194 aaKnown RBP6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 BTG1P62324 171 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 KRT33BQ14525 404 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 CCL14Q16627 93 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 HAGHQ16775 308 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 SPIN3Q5JUX0 258 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 SLC35D3Q5M8T2 416 aa6.89□□□□□ -1.31
SPTBN1-204ENST00000467371 ACSM5Q6NUN0 579 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms