RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 OR52D1Q9H346 318 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 CCDC86Q9H6F5 360 aaKnown RBP16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 HRASLS2Q9NWW9 162 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 USP36Q9P275 1121 aaKnown RBP16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 FBXL4Q9UKA2 621 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 ATXN7L1Q9ULK2 861 aaPredicted RBP16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 FOXJ3Q9UPW0 622 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 PRKNO60260 465 aaPredicted RBP16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 IFNGP01579 166 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 NDUFB7P17568 137 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 ITGA3P26006 1051 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 GABRA3P34903 492 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 DLSTP36957 453 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 RBM39Q14498 530 aaKnown RBP16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 ARHGAP11BQ3KRB8 267 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 DCST2Q5T1A1 773 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 PRAMEF8Q5VWM4 474 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 PRAMEF7Q5VXH5 474 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 OR52W1Q6IF63 320 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 C11orf87Q6NUJ2 197 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 NIPAL3Q6P499 406 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 THSD4Q6ZMP0 1018 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 Q6ZSR6 202 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 REC114Q7Z4M0 266 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 CYB561A3Q8NBI2 242 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 RNF141Q8WVD5 230 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 DERL3Q96Q80 235 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 TMEM231Q9H6L2 316 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 ACKR4Q9NPB9 350 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 CLEC1BQ9P126 229 aa16.4■□□□□ 0.22
SNAPC3-205ENST00000467062 TRAV27A0A087WT01 109 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 PPIHO43447 177 aaKnown RBP16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 KLF4O43474 513 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 SMIM10L1P0DMW3 83 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 HPGDP15428 266 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 HOXA6P31267 233 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 PJVKQ0ZLH3 352 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 OR1Q1Q15612 314 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 GFOD2Q3B7J2 385 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 GJD3Q8N144 294 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 COX18Q8N8Q8 333 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 OR13H1Q8NG92 308 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 OR4N2Q8NGD1 307 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 OR4A4PQ8NGN8 299 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 SMIM10Q96HG1 83 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 PTCHD1Q96NR3 888 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 CLCC1Q96S66 551 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 NAA11Q9BSU3 229 aaPredicted RBP16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 OR51V1Q9H2C8 321 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 NRIP3Q9NQ35 241 aa16.39■□□□□ 0.22
SNAPC3-205ENST00000467062 A6NCN8 305 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 TMEM127O75204 238 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 GYPBP06028 91 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 RPTNQ6XPR3 784 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 FCRLAQ7L513 359 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 ARRDC1Q8N5I2 433 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 NT5CQ8TCD5 201 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 CCDC107Q8WV48 283 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 EDAQ92838 391 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 SLC22A18Q96BI1 424 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 RAB3CQ96E17 227 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 ZFYVE21Q9BQ24 234 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 TSPAN10Q9H1Z9 355 aaPredicted RBP16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 SEC61A2Q9H9S3 476 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 APMAPQ9HDC9 416 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 TMEM100Q9NV29 134 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 GFOD1Q9NXC2 390 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 PILRAQ9UKJ1 303 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 ZMIZ1Q9ULJ6 1067 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 SLCO1B1Q9Y6L6 691 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 WDR87Q6ZQQ6 2873 aa16.39■□□□□ 0.21
SNAPC3-205ENST00000467062 RNF4P78317 190 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 PLAURQ03405 335 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 NNATQ16517 81 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 BEX5Q5H9J7 111 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 OR13C2Q8NGS9 318 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 RERGQ96A58 199 aaPredicted RBP16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 FAM131CQ96AQ9 280 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 FAM60AQ9NP50 221 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 SIDT1Q9NXL6 827 aaKnown RBP16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 TAS2R8Q9NYW2 309 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 HRKO00198 91 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 RBBP9O75884 186 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 HNRNPA2B1P22626 353 aaKnown RBP16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 DPP4P27487 766 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 NDUFS1P28331 727 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 ERV3-1Q14264 604 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 KIR2DS3Q14952 304 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 LBHQ53QV2 105 aaPredicted RBP16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 LY6G6FQ5SQ64 297 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 SLC22A18ASQ8N1D0 253 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 SYNPRQ8TBG9 265 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 DUSP19Q8WTR2 217 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 SLAMF9Q96A28 289 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 HSPA12BQ96MM6 686 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 OCSTAMPQ9BR26 566 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 MRI1Q9BV20 369 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 TMEM27Q9HBJ8 222 aa16.38■□□□□ 0.21
SNAPC3-205ENST00000467062 RNF222A6NCQ9 220 aa16.37■□□□□ 0.21
SNAPC3-205ENST00000467062 ACOD1A6NK06 481 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms