RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 TEKQ02763 1124 aa8□□□□□ -1.13
HPS4-209ENST00000466781 HMGN3Q15651 99 aa8□□□□□ -1.13
HPS4-209ENST00000466781 PRAMEF5Q5TYX0 476 aa8□□□□□ -1.13
HPS4-209ENST00000466781 PRAMEF6Q5VXH4 476 aa8□□□□□ -1.13
HPS4-209ENST00000466781 RSPO2Q6UXX9 243 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 H1FNTQ75WM6 255 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 RPS19BP1Q86WX3 136 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 LACC1Q8IV20 430 aa8□□□□□ -1.13
HPS4-209ENST00000466781 LRRC56Q8IYG6 542 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 TMEM217Q8N7C4 229 aa8□□□□□ -1.13
HPS4-209ENST00000466781 SMAP2Q8WU79 429 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 OR2M2Q96R28 347 aa8□□□□□ -1.13
HPS4-209ENST00000466781 QRSL1Q9H0R6 528 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 FADS1O60427 444 aa8□□□□□ -1.13
HPS4-209ENST00000466781 AKR7A3O95154 331 aa8□□□□□ -1.13
HPS4-209ENST00000466781 GASTP01350 101 aa8□□□□□ -1.13
HPS4-209ENST00000466781 HLA-HP01893 362 aa8□□□□□ -1.13
HPS4-209ENST00000466781 CSF3P09919 207 aa8□□□□□ -1.13
HPS4-209ENST00000466781 CT45A10P0DMU9 189 aa8□□□□□ -1.13
HPS4-209ENST00000466781 HMGA1P17096 107 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 OPRL1P41146 370 aa8□□□□□ -1.13
HPS4-209ENST00000466781 ZNF266Q14584 549 aa8□□□□□ -1.13
HPS4-209ENST00000466781 TESK1Q15569 626 aa8□□□□□ -1.13
HPS4-209ENST00000466781 ADPRMQ3LIE5 342 aa8□□□□□ -1.13
HPS4-209ENST00000466781 NHSL2Q5HYW2 709 aa8□□□□□ -1.13
HPS4-209ENST00000466781 BAGE3Q86Y29 109 aa8□□□□□ -1.13
HPS4-209ENST00000466781 BAGE2Q86Y30 109 aa8□□□□□ -1.13
HPS4-209ENST00000466781 PATZ1Q9HBE1 687 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 BARX1Q9HBU1 254 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 A4GALTQ9NPC4 353 aa8□□□□□ -1.13
HPS4-209ENST00000466781 USP22Q9UPT9 525 aa8□□□□□ -1.13
HPS4-209ENST00000466781 SBF2Q86WG5 1849 aa8□□□□□ -1.13
HPS4-209ENST00000466781 PRKRAO75569 313 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 BCL6P41182 706 aa8□□□□□ -1.13
HPS4-209ENST00000466781 EMP3P54852 163 aa8□□□□□ -1.13
HPS4-209ENST00000466781 UBE2IP63279 158 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 Q499Y3 187 aa8□□□□□ -1.13
HPS4-209ENST00000466781 FRMPD2BQ6IN97 320 aa8□□□□□ -1.13
HPS4-209ENST00000466781 SPEM1Q8N4L4 309 aa8□□□□□ -1.13
HPS4-209ENST00000466781 MS4A8Q9BY19 250 aa8□□□□□ -1.13
HPS4-209ENST00000466781 NMES1Q9C002 83 aa8□□□□□ -1.13
HPS4-209ENST00000466781 CLEC1BQ9P126 229 aa8□□□□□ -1.13
HPS4-209ENST00000466781 RAB22AQ9UL26 194 aa8□□□□□ -1.13
HPS4-209ENST00000466781 ETV7Q9Y603 341 aa8□□□□□ -1.13
HPS4-209ENST00000466781 MYH10P35580 1976 aa8□□□□□ -1.13
HPS4-209ENST00000466781 SERTM2A0A1B0GWG4 89 aa8□□□□□ -1.13
HPS4-209ENST00000466781 H0YIV9 168 aa8□□□□□ -1.13
HPS4-209ENST00000466781 NRG2O14511 850 aaPredicted RBP8□□□□□ -1.13
HPS4-209ENST00000466781 MAP2K6P52564 334 aa8□□□□□ -1.13
HPS4-209ENST00000466781 ADPRHP54922 357 aa8□□□□□ -1.13
HPS4-209ENST00000466781 MRPL58Q14197 206 aaKnown RBP8□□□□□ -1.13
HPS4-209ENST00000466781 BCL7AQ4VC05 210 aa8□□□□□ -1.13
HPS4-209ENST00000466781 SLC35D3Q5M8T2 416 aa8□□□□□ -1.13
HPS4-209ENST00000466781 GRINAQ7Z429 371 aa8□□□□□ -1.13
HPS4-209ENST00000466781 ADGRE4PQ86SQ3 457 aa8□□□□□ -1.13
HPS4-209ENST00000466781 MENTQ9BUN1 341 aa8□□□□□ -1.13
HPS4-209ENST00000466781 PLK3Q9H4B4 646 aa8□□□□□ -1.13
HPS4-209ENST00000466781 POLDIP2Q9Y2S7 368 aa8□□□□□ -1.13
HPS4-209ENST00000466781 LOXHD1Q8IVV2 1947 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 OR7A17O14581 309 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 EIF4E2O60573 245 aaKnown RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 PPP3CBP16298 524 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 MAKP20794 623 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 GLRA1P23415 457 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 BMI1P35226 326 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LIM2P55344 173 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 GPR85P60893 370 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CLINT1Q14677 625 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 PHLDA2Q53GA4 152 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 GFRALQ6UXV0 394 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 FBXO27Q8NI29 283 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LGALS14Q8TCE9 139 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 FAM122AQ96E09 287 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 TCEAL7Q9BRU2 100 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 GPR173Q9NS66 373 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 RGPD3A6NKT7 1758 aaPredicted RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 A0A1B0GWA3 101 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CHEK1O14757 476 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 POU2F2P09086 479 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CD1CP29017 333 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 GPR12P47775 334 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CCR5P51681 352 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 ILKQ13418 452 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 DOK3Q7L591 496 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 OR2AE1Q8NHA4 323 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 WFDC5Q8TCV5 224 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 TM4SF18Q96CE8 201 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 TECTBQ96PL2 329 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LYRM4Q9HD34 91 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 UFSP2Q9NUQ7 469 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 TAS2R16Q9NYV7 291 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 ATXN1LP0C7T5 689 aaKnown RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 RAP2BP61225 183 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 TAF9Q16594 264 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 OR8G2PQ6IF36 304 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 GLIPR1L1Q6UWM5 242 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms