RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CXXC1Q9P0U4 656 aaPredicted RBP17.86■□□□□ 0.45
SDF4-205ENST00000465727 MYEF2Q9P2K5 600 aaKnown RBP17.86■□□□□ 0.45
SDF4-205ENST00000465727 PLEKHA6Q9Y2H5 1048 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 A0A1B0GTH9 108 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 ELOA3DA6NLF2 546 aaPredicted RBP17.86■□□□□ 0.45
SDF4-205ENST00000465727 NPIPB9F8W1W9 429 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 TNFSF14O43557 240 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 TACR3P29371 465 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 PBX2P40425 430 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 ELOCQ15369 112 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 ELOA3BQ3SY89 546 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 TMEM71Q6P5X7 295 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 ZDHHC22Q8N966 263 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 LRRC75AQ8NAA5 344 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 ELOA3Q8NG57 546 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 OR13C8Q8NGS7 320 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 OR6N2Q8NGY6 317 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 SLC41A2Q96JW4 573 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 TLNRD1Q9H1K6 362 aa17.86■□□□□ 0.45
SDF4-205ENST00000465727 ABOP16442 354 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 CCKBRP32239 447 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 KIR3DL2P43630 455 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 AKR1C2P52895 323 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 CXADRP78310 365 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 AKR1C1Q04828 323 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 KIR2DS3Q14952 304 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 ATXN7L3Q14CW9 347 aaPredicted RBP17.85■□□□□ 0.45
SDF4-205ENST00000465727 ITPRIPL2Q3MIP1 535 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 LINC00469Q8N7U9 141 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 C3orf49Q96BT1 292 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 SEC22AQ96IW7 307 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 ZNF587Q96SQ5 575 aaPredicted RBP17.85■□□□□ 0.45
SDF4-205ENST00000465727 SEMA6CQ9H3T2 930 aa17.85■□□□□ 0.45
SDF4-205ENST00000465727 ZNF860A6NHJ4 632 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 BLOC1S5-TXNDC5H3BN57 136 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 IGKV1D-16P01601 117 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CRYBA1P05813 215 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 SMIM6P0DI80 62 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 AQP2P41181 271 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 FAM53BQ14153 422 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ALG10Q5BKT4 473 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 WDR38Q5JTN6 314 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ZNF627Q7L945 461 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 BAP18Q8IXM2 172 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 TMEM52Q8NDY8 209 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 RSC1A1Q92681 617 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 VWCEQ96DN2 955 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ADAT1Q9BUB4 502 aaKnown RBP17.84■□□□□ 0.45
SDF4-205ENST00000465727 ULBP3Q9BZM4 244 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 MSRAQ9UJ68 235 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 PILRAQ9UKJ1 303 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ZNF346Q9UL40 294 aaKnown RBP17.84■□□□□ 0.45
SDF4-205ENST00000465727 DOCK9Q9BZ29 2069 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 TEX13DA0A0J9YY54 714 aaPredicted RBP17.84■□□□□ 0.45
SDF4-205ENST00000465727 CCSO14618 274 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CTSVO60911 334 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ALOX12BO75342 701 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 S100A8P05109 93 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 SLC35E2P0CK97 266 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 FOLR2P14207 255 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CSF2RAP15509 400 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CEBPBP17676 345 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CTXN1P60606 82 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 SCGB2B2Q4G0G5 96 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 NKAPLQ5M9Q1 402 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 PHF19Q5T6S3 580 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 PAPD4Q6PIY7 484 aaKnown RBP17.84■□□□□ 0.45
SDF4-205ENST00000465727 DRAM2Q6UX65 266 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ZNF440Q8IYI8 595 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 OR4K17Q8NGC6 315 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ING5Q8WYH8 240 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 FOXRED1Q96CU9 486 aaPredicted RBP17.84■□□□□ 0.45
SDF4-205ENST00000465727 INTS14Q96SY0 518 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 G6PC3Q9BUM1 346 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 SRMSQ9H3Y6 488 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 KCNK15Q9H427 330 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CAPN10Q9HC96 672 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 SRA1Q9HD15 236 aaKnown RBP17.84■□□□□ 0.45
SDF4-205ENST00000465727 UQCC1Q9NVA1 299 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 CKLFQ9UBR5 152 aa17.84■□□□□ 0.45
SDF4-205ENST00000465727 ZNF208O43345 1280 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 NUDT21O43809 227 aaKnown RBP17.83■□□□□ 0.45
SDF4-205ENST00000465727 CSTAP01040 98 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 CD37P11049 281 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PNMTP11086 282 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PAX6P26367 422 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 HTR2CP28335 458 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PPICP45877 212 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PNLIPRP2P54317 469 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PDZK1IP1Q13113 114 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 ENPP2Q13822 863 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 ZNF74Q16587 644 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 GAB4Q2WGN9 574 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 UNQ6126/PRO20091Q6UXV3 157 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 DPY19L4Q7Z388 723 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PARGQ86W56 976 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 ZNF584Q8IVC4 421 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 RCBTB1Q8NDN9 531 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 PAQR8Q8TEZ7 354 aa17.83■□□□□ 0.45
SDF4-205ENST00000465727 CDC6Q99741 560 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms