RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SLC25A44Q96H78 314 aaPredicted RBP8.27□□□□□ -1.09
USP39-212ENST00000465514 TSPAN32Q96QS1 320 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 RNF121Q9H920 327 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 CDH20Q9HBT6 801 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 SLCO1B3Q9NPD5 702 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 HINT3Q9NQE9 182 aaKnown RBP8.27□□□□□ -1.09
USP39-212ENST00000465514 NANSQ9NR45 359 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 OPN4Q9UHM6 478 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 MMP24Q9Y5R2 645 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 IGLV3-9A0A075B6K5 115 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 TRAPPC13A5PLN9 417 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 C17orf100A8MU93 164 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 KPNA4O00629 521 aaPredicted RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 ZNF500O60304 480 aaPredicted RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 ERLIN1O75477 346 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 FARS2O95363 451 aaKnown RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 HIST1H2ABP04908 130 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 LCKP06239 509 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 PGA4P0DJD7 388 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 PGA3P0DJD8 388 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ANPEPP15144 967 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ZNF250P15622 560 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 PCGF2P35227 344 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ATP4BP51164 291 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 KLF3P57682 345 aaPredicted RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 ERVS71-1P61550 626 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 MVKQ03426 396 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 RBBP4Q09028 425 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SELPLGQ14242 412 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SLC9A3R2Q15599 337 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 CYP51A1Q16850 503 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 BEAN1Q3B7T3 259 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 PCGF3Q3KNV8 242 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 AVPI1Q5T686 147 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 TMEM154Q6P9G4 183 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SPATC1Q76KD6 591 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 HIST3H2AQ7L7L0 130 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SLC16A14Q7RTX9 510 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 DPPA2Q7Z7J5 298 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 TSPYL5Q86VY4 417 aaPredicted RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 KIR3DL3Q8N743 410 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 C11orf65Q8NCR3 313 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 OR4D11Q8NGI4 311 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 VANGL1Q8TAA9 524 aaPredicted RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 ZNF519Q8TB69 540 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SYNPRQ8TBG9 265 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 LRRC8CQ8TDW0 803 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ADAMTS16Q8TE57 1224 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SNX33Q8WV41 574 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 C11orf40Q8WZ69 217 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 HIST1H2ACQ93077 130 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 MCHR2Q969V1 340 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ZNF48Q96MX3 618 aaPredicted RBP8.26□□□□□ -1.09
USP39-212ENST00000465514 C1orf198Q9H425 327 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 C7orf69Q9H7B7 122 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ZNF665Q9H7R5 613 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 ZNF229Q9UJW7 825 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 SLC7A7Q9UM01 511 aa8.26□□□□□ -1.09
USP39-212ENST00000465514 IGHV1-69-2A0A0G2JMI3 117 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 G3V4G9 280 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 BLOC1S5-TXNDC5H3BN57 136 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 SNAP29O95721 258 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 PTHP01270 115 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 IGHG1P01857 330 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 ASAH2BP0C7U1 165 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 UMPSP11172 480 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 CD247P20963 164 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 CRYBB2P43320 205 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 RAD52P43351 418 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 ZNF84P51523 738 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 UCP2P55851 309 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 CLRN1P58418 232 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 MTPNP58546 118 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 PLP2Q04941 152 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 HIST3H3Q16695 136 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 TBC1D28Q2M2D7 210 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 SLC36A2Q495M3 483 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 MMEL1Q495T6 779 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 ASPHD2Q6ICH7 369 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 DHDDSQ86SQ9 333 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 BCL6BQ8N143 479 aaPredicted RBP8.25□□□□□ -1.09
USP39-212ENST00000465514 LRRC18Q8N456 261 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 ICA1LQ8NDH6 482 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 RBM15BQ8NDT2 890 aaKnown RBP8.25□□□□□ -1.09
USP39-212ENST00000465514 OR1J2Q8NGS2 313 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 GTF3AQ92664 365 aaKnown RBP8.25□□□□□ -1.09
USP39-212ENST00000465514 MPP4Q96JB8 637 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 ZNF347Q96SE7 839 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 BCL2L14Q9BZR8 327 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 SLC19A3Q9BZV2 496 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 LRMDAQ9H2I8 198 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 SLCO1C1Q9NYB5 712 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 NKIRAS2Q9NYR9 191 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 ZNF69Q9UC07 566 aa8.25□□□□□ -1.09
USP39-212ENST00000465514 LEF1Q9UJU2 399 aaPredicted RBP8.25□□□□□ -1.09
USP39-212ENST00000465514 IQCMA0A1B0GVH7 501 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 A0A1W2PRG6 482 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 SLC22A31A6NKX4 558 aa8.24□□□□□ -1.09
USP39-212ENST00000465514 CLDN34H7C241 214 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms