RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 NOS3P29474 1203 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 CENPAP49450 140 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 CDH11P55287 796 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 NAAAQ02083 359 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 GPR139Q6DWJ6 353 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 SSX8Q7RTT4 187 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 SLC16A14Q7RTX9 510 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.13□□□□□ -0.79
CUX1-207ENST00000465461 JAZF1Q86VZ6 243 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 IQCF1Q8N6M8 205 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 TSSK6Q9BXA6 273 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 NUAK2Q9H093 628 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 SMURF2Q9HAU4 748 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 SRA1Q9HD15 236 aaKnown RBP10.13□□□□□ -0.79
CUX1-207ENST00000465461 EMC7Q9NPA0 242 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 TBC1D23Q9NUY8 699 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 IL20Q9NYY1 176 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 REV1Q9UBZ9 1251 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 LAMP3Q9UQV4 416 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 COA3Q9Y2R0 106 aaPredicted RBP10.13□□□□□ -0.79
CUX1-207ENST00000465461 CSMD2Q7Z408 3487 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 POLQO75417 2590 aa10.13□□□□□ -0.79
CUX1-207ENST00000465461 PDZD2O15018 2839 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 HEATR1Q9H583 2144 aaKnown RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 OR6C68A6NDL8 312 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 ARPC3O15145 178 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 UBL3O95164 117 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 FARS2O95363 451 aaKnown RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 RAB36O95755 333 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 ZNF14P17017 642 aaPredicted RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 POU1F1P28069 291 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 ARR3P36575 388 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 MRPS34P82930 218 aaKnown RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.12□□□□□ -0.79
CUX1-207ENST00000465461 ATP6AP1Q15904 470 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 PGGHGQ32M88 737 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 SLC36A3Q495N2 470 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 VHLLQ6RSH7 139 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 ZNF584Q8IVC4 421 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 CCDC36Q8IYA8 594 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 OR6V1Q8N148 313 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 CYB561A3Q8NBI2 242 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 OR52L1Q8NGH7 329 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 SMAP2Q8WU79 429 aaPredicted RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 NANOS1Q8WY41 292 aaKnown RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 FBXW5Q969U6 566 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 FBXO17Q96EF6 278 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 DUS3LQ96G46 650 aaKnown RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 CCL19Q99731 98 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 SIAEQ9HAT2 523 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 RPRD1BQ9NQG5 326 aaKnown RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 VSX1Q9NZR4 365 aaPredicted RBP10.12□□□□□ -0.79
CUX1-207ENST00000465461 NOTCH2Q04721 2471 aa10.12□□□□□ -0.79
CUX1-207ENST00000465461 ROS1P08922 2347 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 IGHV2OR16-5A0A0B4J2B6 119 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ANKRD65E5RJM6 399 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 H3BN98 237 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 MGRN1O60291 552 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 DEAF1O75398 565 aaPredicted RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 KHDRBS3O75525 346 aaKnown RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 MMP7P09237 267 aaPredicted RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 APEHP13798 732 aaKnown RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 ZNF32P17041 273 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 HOXB6P17509 224 aaKnown RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 NPR2P20594 1047 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 GSTM3P21266 225 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 FASP25445 335 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 DAPP51397 102 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ART1P52961 327 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ACTR3P61158 418 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 HGFACQ04756 655 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ENDOGQ14249 297 aaKnown RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 MEP1BQ16820 701 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ZNF362Q5T0B9 420 aaPredicted RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 SHQ1Q6PI26 577 aaKnown RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 FOXL2NBQ6ZUU3 175 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 DEPDC4Q8N2C3 294 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 PAQR4Q8N4S7 273 aaPredicted RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 ZNF611Q8N823 705 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ATG16L2Q8NAA4 619 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 NPEPL1Q8NDH3 523 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 CPEB3Q8NE35 698 aaKnown RBP10.11□□□□□ -0.79
CUX1-207ENST00000465461 OR5K1Q8NHB7 308 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 AKR7LQ8NHP1 331 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 FNDC8Q8TC99 324 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ZNRF4Q8WWF5 429 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 PKP2Q99959 881 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 KCNS3Q9BQ31 491 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 CCNB1IP1Q9NPC3 277 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 POLE4Q9NR33 117 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 B9D1Q9UPM9 204 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 DSCAMO60469 2012 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 SPG11Q96JI7 2443 aa10.11□□□□□ -0.79
CUX1-207ENST00000465461 ARRDC5A6NEK1 342 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 H3BNX3 289 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 MITFO75030 526 aaPredicted RBP10.1□□□□□ -0.79
CUX1-207ENST00000465461 ENTPD5O75356 428 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 RENP00797 406 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 CD8AP01732 235 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms