RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SEC16AO15027 2179 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 PRUNE2Q8WUY3 3088 aa16.52■□□□□ 0.23
SYNE4-204ENST00000465425 UBE2QL1A1L167 161 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 CRYZL1O95825 349 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 GIPP09681 153 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 RIDAP52758 137 aaKnown RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 EFNB2P52799 333 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 RAB14P61106 215 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 INSM1Q01101 510 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 POU4F3Q15319 338 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 GRK1Q15835 563 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 OR7E24Q6IFN5 339 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 OGFOD3Q6PK18 319 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 GRINAQ7Z429 371 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 PLXDC1Q8IUK5 500 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 FAM3DQ96BQ1 224 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 DPYSL5Q9BPU6 564 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 CDCP1Q9H5V8 836 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 MAB21L2Q9Y586 359 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 PCDH15Q96QU1 1955 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 MYO15AQ9UKN7 3530 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 NUP210LQ5VU65 1888 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 WISP1O95388 367 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 AHSA1O95433 338 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 CD2P06729 351 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 CTLA4P16410 223 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 CSRP1P21291 193 aaKnown RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 EIF2B1Q14232 305 aaKnown RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 TEX30Q5JUR7 227 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 ADGRG3Q86Y34 549 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 OR4C16Q8NGL9 310 aa16.51■□□□□ 0.23
SYNE4-204ENST00000465425 MRPL22Q9NWU5 206 aaKnown RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 VSX1Q9NZR4 365 aaPredicted RBP16.51■□□□□ 0.23
SYNE4-204ENST00000465425 TRAV18A0A075B6X5 111 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 ARPC4-TTLL3A0A0A6YYG9 625 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 LOC100289279A0A1B0GTE1 492 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 PYCARD-AS1I3L0S3 204 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 SLC17A2O00624 439 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 CFPP27918 469 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 MECP2P51608 486 aaKnown RBP16.5■□□□□ 0.23
SYNE4-204ENST00000465425 RAP2BP61225 183 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 GLO1Q04760 184 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 MELKQ14680 651 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 ETFDHQ16134 617 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 C2orf76Q3KRA6 126 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 NDUFAF7Q7L592 441 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 PLPP7Q8NBV4 271 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 OR11A1Q9GZK7 315 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 VN1R1Q9GZP7 353 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 LAMA1P25391 3075 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 IGHV1OR21-1A0A087WYE8 117 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 IGLV1-36A0A0B4J1U3 117 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 SLC22A23A1A5C7 686 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 DUX1O43812 170 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 OR2T1O43869 369 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 NPIPB7O75200 414 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 PNPP00491 289 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 RLN1P04808 185 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 GTF2F2P13984 249 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 FOLR1P15328 257 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 ROM1Q03395 351 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 IKZF1Q13422 519 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 TOR2AQ5JU69 321 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 ZNF248Q8NDW4 579 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 GPR119Q8TDV5 335 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 DUSP19Q8WTR2 217 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 ZNF587Q96SQ5 575 aaPredicted RBP16.5■□□□□ 0.23
SYNE4-204ENST00000465425 GLTPQ9NZD2 209 aa16.5■□□□□ 0.23
SYNE4-204ENST00000465425 A0A1B0GX78 115 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 OR6C76A6NM76 312 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 PLPP3O14495 311 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 CRABP1P29762 137 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 PRSS3P35030 304 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 ARPC4P59998 168 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 CLLU1Q5K131 121 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 YOD1Q5VVQ6 348 aaPredicted RBP16.49■□□□□ 0.23
SYNE4-204ENST00000465425 CARFQ8N187 725 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 UXS1Q8NBZ7 420 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 PIPOXQ9P0Z9 390 aa16.49■□□□□ 0.23
SYNE4-204ENST00000465425 SOX1O00570 391 aaPredicted RBP16.48■□□□□ 0.23
SYNE4-204ENST00000465425 KDM4BO94953 1096 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 AKAIN1P0CW23 69 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 SRFP11831 508 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 GUCA2AQ02747 115 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 GLT8D1Q68CQ7 371 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 TMEM225Q6GV28 225 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 D2HGDHQ8N465 521 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 OR52B4Q8NGK2 314 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 PPP1R14AQ96A00 147 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 RBP7Q96R05 134 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 ABHD6Q9BV23 337 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 ATG5Q9H1Y0 275 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 KCNK15Q9H427 330 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 LRP12Q9Y561 859 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 AUP1Q9Y679 476 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 MEIS3P1A6NDR6 274 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 FADS1O60427 444 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 NXPH1P58417 271 aa16.48■□□□□ 0.23
SYNE4-204ENST00000465425 MFGE8Q08431 387 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms