RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 ZNF133P52736 654 aaPredicted RBP19.21■□□□□ 0.67
USP4-208ENST00000464168 UGT2B15P54855 530 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 HSF2Q03933 536 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 RPL18Q07020 188 aaKnown RBP19.21■□□□□ 0.67
USP4-208ENST00000464168 TMEM255AQ5JRV8 349 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 DHDDSQ86SQ9 333 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 DPP10Q8N608 796 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 NOXO1Q8NFA2 376 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 NANPQ8TBE9 248 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 LRRC8CQ8TDW0 803 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 ASB10Q8WXI3 467 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 RAB1CQ92928 201 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 TAMM41Q96BW9 452 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 TIMD4Q96H15 378 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 CGREF1Q99674 301 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 SIAEQ9HAT2 523 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 OPN4Q9UHM6 478 aa19.21■□□□□ 0.67
USP4-208ENST00000464168 LEF1Q9UJU2 399 aaPredicted RBP19.21■□□□□ 0.67
USP4-208ENST00000464168 A0A1W2PRG6 482 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 CENPBD1B2RD01 187 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 MGRN1O60291 552 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 TRMUO75648 421 aaKnown RBP19.2■□□□□ 0.66
USP4-208ENST00000464168 IGHV1-46P01743 117 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 ACADSP16219 412 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 MAKP20794 623 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 CCNOP22674 350 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 STOMP27105 288 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 CDAP32320 146 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 MMP15P51511 669 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 FAM209AQ5JX71 171 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 C10orf128Q5T292 105 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 PATL1Q86TB9 770 aaKnown RBP19.2■□□□□ 0.66
USP4-208ENST00000464168 RETREG3Q86VR2 466 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 ZNF101Q8IZC7 436 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 ZDHHC22Q8N966 263 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 CCL17Q92583 94 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 ELMOD3Q96FG2 381 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 KAT8Q9H7Z6 458 aaKnown RBP19.2■□□□□ 0.66
USP4-208ENST00000464168 UGT2A1Q9Y4X1 527 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 ARHGAP32A7KAX9 2087 aa19.2■□□□□ 0.66
USP4-208ENST00000464168 LOC100509620A0A075B734 347 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 MCIDASD6RGH6 385 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 SPRY3O43610 288 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 FSHBP01225 129 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 MPV17P39210 176 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 WNT5AP41221 380 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 CRYBA2P53672 197 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 MRPS34P82930 218 aaKnown RBP19.19■□□□□ 0.66
USP4-208ENST00000464168 ZNF718Q3SXZ3 478 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 SPATA46Q5T0L3 261 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 THEM4Q5T1C6 240 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 MARS2Q96GW9 593 aaKnown RBP19.19■□□□□ 0.66
USP4-208ENST00000464168 POM121L2Q96KW2 1035 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 RABEP2Q9H5N1 569 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 C7orf69Q9H7B7 122 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 NANOGQ9H9S0 305 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 NDUFAF1Q9Y375 327 aa19.19■□□□□ 0.66
USP4-208ENST00000464168 UBOX5O94941 541 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 SLC2A10O95528 541 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 MT-ND1P03886 318 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 FUT1P19526 365 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 GATA3P23771 443 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 PCGF2P35227 344 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 AQP2P41181 271 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 AWAT1Q58HT5 328 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 ARMC4Q5T2S8 1044 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 ZNF771Q7L3S4 317 aaPredicted RBP19.18■□□□□ 0.66
USP4-208ENST00000464168 SLC30A8Q8IWU4 369 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 BPIFB2Q8N4F0 458 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 IPCEF1Q8WWN9 437 aaPredicted RBP19.18■□□□□ 0.66
USP4-208ENST00000464168 NABP1Q96AH0 204 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 NMD3Q96D46 503 aaKnown RBP19.18■□□□□ 0.66
USP4-208ENST00000464168 GAL3ST1Q99999 423 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 KCNN2Q9H2S1 579 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 CCNB1IP1Q9NPC3 277 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 INIPQ9NRY2 104 aa19.18■□□□□ 0.66
USP4-208ENST00000464168 IGKV1D-43A0A0B4J1Z2 117 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 C5orf49A4QMS7 147 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 ZNF32P17041 273 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 GCH1P30793 250 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 DAP3P51398 398 aaKnown RBP19.17■□□□□ 0.66
USP4-208ENST00000464168 HDDC2Q7Z4H3 204 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 NKAIN4Q8IVV8 208 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 MOSPD2Q8NHP6 518 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 PFN4Q8NHR9 129 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 KLF14Q8TD94 323 aaPredicted RBP19.17■□□□□ 0.66
USP4-208ENST00000464168 SLC26A7Q8TE54 656 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 C20orf141Q9NUB4 165 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 EIF3KQ9UBQ5 218 aaKnown RBP19.17■□□□□ 0.66
USP4-208ENST00000464168 TRRAPQ9Y4A5 3859 aa19.17■□□□□ 0.66
USP4-208ENST00000464168 ZSCAN5BA6NJL1 495 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 OR7A10O76100 309 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 PRSS23O95084 383 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 TSPAN19P0C672 248 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 GZMMP51124 257 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 LCN2P80188 198 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 PSG4Q00888 419 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 SGCAQ16586 387 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 BEND6Q5SZJ8 279 aaPredicted RBP19.16■□□□□ 0.66
USP4-208ENST00000464168 MBNL2Q5VZF2 373 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms