RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 OR2A5Q96R48 311 aa2.53□□□□□ -2
USP9X-204ENST00000463829 NDFIP1Q9BT67 221 aa2.53□□□□□ -2
USP9X-204ENST00000463829 ISYNA1Q9NPH2 558 aa2.53□□□□□ -2
USP9X-204ENST00000463829 PISDQ9UG56 409 aa2.53□□□□□ -2
USP9X-204ENST00000463829 ING4Q9UNL4 249 aa2.53□□□□□ -2
USP9X-204ENST00000463829 MRPS18BQ9Y676 258 aaKnown RBP2.53□□□□□ -2
USP9X-204ENST00000463829 IKBKGQ9Y6K9 419 aa2.53□□□□□ -2
USP9X-204ENST00000463829 CNTNAP1P78357 1384 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 F6UB75 175 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CDC7O00311 574 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 MRPS12O15235 138 aaKnown RBP2.52□□□□□ -2.01
USP9X-204ENST00000463829 EEDO75530 441 aaKnown RBP2.52□□□□□ -2.01
USP9X-204ENST00000463829 CTDNEP1O95476 244 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 AIFM1O95831 613 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CRYGBP07316 175 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 GNAO1P09471 354 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 ZNF43P17038 809 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CDKN2BP42772 138 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 NAMPTP43490 491 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CCNHP51946 323 aaPredicted RBP2.52□□□□□ -2.01
USP9X-204ENST00000463829 ACTA2P62736 377 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 ACTG2P63267 376 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 ACTC1P68032 377 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 ERCC8Q13216 396 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 NIPA1Q7RTP0 329 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 OR5W2Q8NH69 310 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 AKR7LQ8NHP1 331 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 UBALD1Q8TB05 177 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CREB3L1Q96BA8 519 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CCDC126Q96EE4 140 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 ATP5SQ99766 215 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 CHAC1Q9BUX1 264 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 RPP21Q9H633 154 aaKnown RBP2.52□□□□□ -2.01
USP9X-204ENST00000463829 GOLT1BQ9Y3E0 138 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
USP9X-204ENST00000463829 SLIT3O75094 1523 aa2.52□□□□□ -2.01
USP9X-204ENST00000463829 USP47Q96K76 1375 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 IGHV3-74A0A0B4J1X5 117 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 A0A1W2PP18 115 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 XKRY2A2RUG3 117 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 LRCOL1A6NCL2 159 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 GABARAPO95166 117 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 CLIC3O95833 236 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 IGHDP01880 384 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 UQCRFS1P1P0C7P4 283 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 TROVE2P10155 538 aaKnown RBP eCLIP2.51□□□□□ -2.01
USP9X-204ENST00000463829 FOXN2P32314 431 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 ZSCAN26Q16670 478 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 ANKRD26P1Q6NSI1 321 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 NANOGP8Q6NSW7 305 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 DUX4L9Q6RFH8 374 aaPredicted RBP2.51□□□□□ -2.01
USP9X-204ENST00000463829 OR56B2PQ8NGI1 322 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 PKNOX2Q96KN3 472 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 SERPINB12Q96P63 405 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 PARP12Q9H0J9 701 aaKnown RBP2.51□□□□□ -2.01
USP9X-204ENST00000463829 SAMSN1Q9NSI8 373 aaKnown RBP2.51□□□□□ -2.01
USP9X-204ENST00000463829 ZNF222Q9UK12 451 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 LSM7Q9UK45 103 aaKnown RBP2.51□□□□□ -2.01
USP9X-204ENST00000463829 PSG8Q9UQ74 426 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 NUP214P35658 2090 aaPredicted RBP2.51□□□□□ -2.01
USP9X-204ENST00000463829 DOCK9Q9BZ29 2069 aa2.51□□□□□ -2.01
USP9X-204ENST00000463829 MAPK8IP3Q9UPT6 1336 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 ZNF816-ZNF321PA0A0X1KG74 233 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 A0A1B0GVX0 72 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 HEATR9A2RTY3 570 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 SPECC1L-ADORA2AF8WAN1 911 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 BET1O15155 118 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 B4GALT5O43286 388 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 SNX4O95219 450 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 SLC25A14O95258 325 aaPredicted RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 MRPL3P09001 348 aaKnown RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 ZNF24P17028 368 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 CEACAM6P40199 344 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 NSG1P42857 185 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 TNNT2P45379 298 aaPredicted RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 CSNK1A1P48729 337 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 ACLYP53396 1101 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 RAP1AP62834 184 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 ARG2P78540 354 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 ADARB1P78563 741 aaKnown RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 LY6G6FQ5SQ64 297 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 THEM4Q5T1C6 240 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 SPECC1LQ69YQ0 1117 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 SASS6Q6UVJ0 657 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 FAM43BQ6ZT52 329 aaPredicted RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 NCCRP1Q6ZVX7 275 aaPredicted RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 ABHD12BQ7Z5M8 362 aaPredicted RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 BIVMQ86UB2 503 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 ZNF695Q8IW36 515 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 TTC5Q8N0Z6 440 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 NOXO1Q8NFA2 376 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 RASD2Q96D21 266 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 CENPKQ9BS16 269 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 SLC25A2Q9BXI2 301 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 FGF20Q9NP95 211 aaPredicted RBP2.5□□□□□ -2.01
USP9X-204ENST00000463829 KCNJ16Q9NPI9 418 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 FAM49BQ9NUQ9 324 aa2.5□□□□□ -2.01
USP9X-204ENST00000463829 YTHDF2Q9Y5A9 579 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms