RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 MMP11P24347 488 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 GCAP28676 217 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 CALCRP30988 508 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 RDXP35241 583 aaKnown RBP3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 KLRC3Q07444 240 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 IL24Q13007 206 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 ATP6AP1Q15904 470 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 LRRC10Q5BKY1 277 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 FAM43BQ6ZT52 329 aaPredicted RBP3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 PCP2Q8IVA1 136 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 VSTM4Q8IW00 320 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 HTR3CQ8WXA8 447 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 EFHD2Q96C19 240 aaPredicted RBP3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 ASB9Q96DX5 294 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 ZNF578Q96N58 590 aaPredicted RBP3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 RPRD1AQ96P16 312 aaPredicted RBP3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 TAAR1Q96RJ0 339 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 RAB34Q9BZG1 259 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 ING2Q9H160 280 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 LRRC40Q9H9A6 602 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 POPDC2Q9HBU9 364 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 ZNF226Q9NYT6 803 aa3.16□□□□□ -1.9
CCDC144A-211ENST00000463809 MED23Q9ULK4 1368 aa3.15□□□□□ -1.9
CCDC144A-211ENST00000463809 IDSB3KWA1 339 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 RGS16O15492 202 aaPredicted RBP3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 MBTPS2O43462 519 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ANGPTL7O43827 346 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 IGLV3-19P01714 112 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 CXCL5P42830 114 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 SSR1P43307 286 aaKnown RBP3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ACTA2P62736 377 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ACTC1P68032 377 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ENPEPQ07075 957 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 CHIT1Q13231 466 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 DPYSL2Q16555 572 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 PARP15Q460N3 678 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ABCA11PQ4W5N1 156 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 KDELC1Q6UW63 502 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ZNF620Q6ZNG0 422 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 Q6ZR03 302 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 NLRP9Q7RTR0 991 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ASCL5Q7RTU5 278 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ZNF709Q8N972 641 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 OR10G9Q8NGN4 311 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 SEC22AQ96IW7 307 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 NPAS2Q99743 824 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 DEFB127Q9H1M4 99 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 LRRN3Q9H3W5 708 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 CDH9Q9ULB4 789 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 CLEC4AQ9UMR7 237 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 MEMO1Q9Y316 297 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 TIMM10BQ9Y5J6 103 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 MTCH2Q9Y6C9 303 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 ALPK3Q96L96 1907 aa3.15□□□□□ -1.91
CCDC144A-211ENST00000463809 NCOR1O75376 2440 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 RPAP1Q9BWH6 1393 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 HTTP42858 3142 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 LRRC37A2A6NM11 1700 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 IGLV11-55A0A075B6I3 123 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 CXCL11O14625 94 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 SUPT3HO75486 399 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 ATP5LO75964 103 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 DIRAS1O95057 198 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 POU2F1P14859 743 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 IL9P15248 144 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 COX5AP20674 150 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 BTCP35070 178 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 GRIA1P42261 906 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 ARRB1P49407 418 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 CEBPDP49716 269 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 PKNOX1P55347 436 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 IRX3P78415 501 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 C1orf61Q13536 156 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 KIAA0087Q14695 138 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 TMEM183BQ1AE95 376 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 CENPPQ6IPU0 288 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 UTS2BQ765I0 119 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 TMEM183AQ8IXX5 376 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 FAM133AQ8N9E0 248 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 OR4K14Q8NGD5 310 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 FRZBQ92765 325 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 ZBED3Q96IU2 234 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 CLCC1Q96S66 551 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 SLC39A3Q9BRY0 314 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 TMEM43Q9BTV4 400 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 TDRD3Q9H7E2 651 aaKnown RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 UBE2ZQ9H832 354 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 SIAEQ9HAT2 523 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 SMOXQ9NWM0 555 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 QPCTLQ9NXS2 382 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 EXTL2Q9UBQ6 330 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 SLC25A15Q9Y619 301 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 UBR2Q8IWV8 1755 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 BDP1A6H8Y1 2624 aa3.14□□□□□ -1.91
CCDC144A-211ENST00000463809 TRAV26-1A0A087WT03 109 aa3.13□□□□□ -1.91
CCDC144A-211ENST00000463809 MED7O43513 233 aa3.13□□□□□ -1.91
CCDC144A-211ENST00000463809 UGT1A9O60656 530 aa3.13□□□□□ -1.91
CCDC144A-211ENST00000463809 PFKFB2O60825 505 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms