RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SDR9C7Q8NEX9 313 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 SLC38A2Q96QD8 506 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 RBM4BQ9BQ04 359 aaKnown RBP17.28■□□□□ 0.36
COL9A3-204ENST00000463487 RBM4Q9BWF3 364 aaKnown RBP17.28■□□□□ 0.36
COL9A3-204ENST00000463487 RNF121Q9H920 327 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 NPAP1Q9NZP6 1156 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 UGT2A1Q9Y4X1 527 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 ORC6Q9Y5N6 252 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 SAC3D1A6NKF1 404 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 C12orf71A8MTZ7 269 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 ABCD4O14678 606 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 SIAH2O43255 324 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 PTHP01270 115 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 CRYAAP02489 173 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 HMGN1P05114 100 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 PAICSP22234 425 aaKnown RBP17.27■□□□□ 0.36
COL9A3-204ENST00000463487 IGFBP5P24593 272 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 LAP3P28838 519 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 CDAP32320 146 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 DAPP51397 102 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 ESRRGP62508 458 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 TUBA1BP68363 451 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 TUBA4AP68366 448 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 GLO1Q04760 184 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 PLP2Q04941 152 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 NPRL3Q12980 569 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 FAM27BQ5VT28 67 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 ZNF704Q6ZNC4 412 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-204ENST00000463487 TUBA1AQ71U36 451 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 MDP1Q86V88 176 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 PQLC1Q8N2U9 271 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-204ENST00000463487 IL17RDQ8NFM7 739 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 OR2T4Q8NH00 348 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 WACQ9BTA9 647 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 NUAK2Q9H093 628 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 RACGAP1Q9H0H5 632 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 C1orf198Q9H425 327 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 RPRD1BQ9NQG5 326 aaKnown RBP17.27■□□□□ 0.36
COL9A3-204ENST00000463487 CRNNQ9UBG3 495 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-204ENST00000463487 FKBP7Q9Y680 259 aa17.27■□□□□ 0.36
COL9A3-204ENST00000463487 IGKV1D-43A0A0B4J1Z2 117 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 DPRXA6NFQ7 191 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 IGKV3-15P01624 115 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 TP53P04637 393 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-204ENST00000463487 IGFBP1P08833 259 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-204ENST00000463487 CTLA4P16410 223 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 GIPRP48546 466 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 PTDSS1P48651 473 aaKnown RBP17.26■□□□□ 0.35
COL9A3-204ENST00000463487 CENPAP49450 140 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 RAB1AP62820 205 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 PIGFQ07326 219 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 GINS1Q14691 196 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 KDM4DQ6B0I6 523 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 SLC22A25Q6T423 547 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 FOXL2NBQ6ZUU3 175 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 SKA3Q8IX90 412 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 LRRC18Q8N456 261 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 OR4Q3Q8NH05 313 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 PLEKHA8Q96JA3 519 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 TMEM204Q9BSN7 226 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 CMC2Q9NRP2 79 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 POU2F3Q9UKI9 436 aa17.26■□□□□ 0.35
COL9A3-204ENST00000463487 BAG2O95816 211 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 IGLV1-44P01699 117 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 CST2P09228 141 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 IDH3GP51553 393 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-204ENST00000463487 CRISP1P54107 249 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 HSF2Q03933 536 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 NPEPL1Q8NDH3 523 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 NABP1Q96AH0 204 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 LURAP1Q96LR2 239 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 HS3ST6Q96QI5 342 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 SLC25A19Q9HC21 320 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 SRA1Q9HD15 236 aaKnown RBP17.25■□□□□ 0.35
COL9A3-204ENST00000463487 POLE4Q9NR33 117 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 B3GNT2Q9NY97 397 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 COA3Q9Y2R0 106 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-204ENST00000463487 POLR1DQ9Y2S0 133 aa17.25■□□□□ 0.35
COL9A3-204ENST00000463487 UNC79Q9P2D8 2635 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 IGHV1-18A0A0C4DH31 117 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 IQCMA0A1B0GVH7 501 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 ANKRD65E5RJM6 399 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 HLA-DQA2P01906 255 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 ADAM5Q6NVV9 412 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 SYT9Q86SS6 491 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 ALDH16A1Q8IZ83 802 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 SLC37A3Q8NCC5 494 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 PROKR2Q8NFJ6 384 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 OR10H5Q8NGA6 315 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 CIB1Q99828 191 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 B9D1Q9UPM9 204 aa17.24■□□□□ 0.35
COL9A3-204ENST00000463487 OR6C68A6NDL8 312 aa17.23■□□□□ 0.35
COL9A3-204ENST00000463487 CECR9P0C854 216 aa17.23■□□□□ 0.35
COL9A3-204ENST00000463487 LOXP28300 417 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-204ENST00000463487 BLVRAP53004 296 aa17.23■□□□□ 0.35
COL9A3-204ENST00000463487 RAD23AP54725 363 aa17.23■□□□□ 0.35
COL9A3-204ENST00000463487 LSM6P62312 80 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms