RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 IL20Q9NYY1 176 aa15.35■□□□□ 0.05
VPS52-214ENST00000463486 VSX1Q9NZR4 365 aaPredicted RBP15.35■□□□□ 0.05
VPS52-214ENST00000463486 PPP1R3DO95685 299 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 IGFBP1P08833 259 aaPredicted RBP15.34■□□□□ 0.05
VPS52-214ENST00000463486 CD79AP11912 226 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 CAPZA2P47755 286 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 ZNF84P51523 738 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 IDH3GP51553 393 aaPredicted RBP15.34■□□□□ 0.05
VPS52-214ENST00000463486 CBX1P83916 185 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 KRR1Q13601 381 aaKnown RBP15.34■□□□□ 0.05
VPS52-214ENST00000463486 ZNF362Q5T0B9 420 aaPredicted RBP15.34■□□□□ 0.05
VPS52-214ENST00000463486 FAM27BQ5VT28 67 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 CD300LDQ6UXZ3 194 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 RASSF6Q6ZTQ3 369 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 DTX2Q86UW9 622 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 AQP11Q8NBQ7 271 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 OR8D4Q8NGM9 314 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 FANK1Q8TC84 345 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 NSMAFQ92636 917 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 DUS3LQ96G46 650 aaKnown RBP15.34■□□□□ 0.05
VPS52-214ENST00000463486 DDOQ99489 341 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 CCL19Q99731 98 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 DHRS9Q9BPW9 319 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 GRIP2Q9C0E4 1043 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 EGLN3Q9H6Z9 239 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 LAMP3Q9UQV4 416 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 CDH10Q9Y6N8 788 aa15.34■□□□□ 0.05
VPS52-214ENST00000463486 IGHV2OR16-5A0A0B4J2B6 119 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 BHLHE40O14503 412 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 MGRN1O60291 552 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 UBL3O95164 117 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 NR2C1P13056 603 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 ZNF35P13682 527 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 CTLA4P16410 223 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 SLC6A6P31641 620 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 ADCK1Q86TW2 530 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 FBXO17Q96EF6 278 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 ERMAPQ96PL5 475 aaPredicted RBP15.33■□□□□ 0.04
VPS52-214ENST00000463486 TRAF4Q9BUZ4 470 aaPredicted RBP15.33■□□□□ 0.04
VPS52-214ENST00000463486 NDEL1Q9GZM8 345 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 MTORP42345 2549 aa15.33■□□□□ 0.04
VPS52-214ENST00000463486 ARRDC5A6NEK1 342 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 DCTN6O00399 190 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 SOCS2O14508 198 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 TMCC2O75069 709 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 CRYAAP02489 173 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 SERPINA5P05154 406 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 NPR2P20594 1047 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 TTKP33981 857 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 PTDSS1P48651 473 aaKnown RBP15.32■□□□□ 0.04
VPS52-214ENST00000463486 RPS6KA3P51812 740 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 NKX6-1P78426 367 aaPredicted RBP15.32■□□□□ 0.04
VPS52-214ENST00000463486 DBPQ10586 325 aaPredicted RBP15.32■□□□□ 0.04
VPS52-214ENST00000463486 NPRL3Q12980 569 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 RAB39AQ14964 217 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 MST1LQ2TV78 715 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 HS3ST5Q8IZT8 346 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 OR10G2Q8NGC3 310 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 GTPBP3Q969Y2 492 aaKnown RBP15.32■□□□□ 0.04
VPS52-214ENST00000463486 FEVQ99581 238 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 NIPSNAP1Q9BPW8 284 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 SYT4Q9H2B2 425 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 DNAJB9Q9UBS3 223 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 REV1Q9UBZ9 1251 aa15.32■□□□□ 0.04
VPS52-214ENST00000463486 XKRYO14609 159 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 IDH3BO43837 385 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 FARS2O95363 451 aaKnown RBP15.31■□□□□ 0.04
VPS52-214ENST00000463486 HIST1H1CP16403 213 aaKnown RBP15.31■□□□□ 0.04
VPS52-214ENST00000463486 LAP3P28838 519 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 ENDOGQ14249 297 aaKnown RBP15.31■□□□□ 0.04
VPS52-214ENST00000463486 SGCAQ16586 387 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 ZNF544Q6NX49 715 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 UGT2A3Q6UWM9 527 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 CCDC121Q6ZUS5 278 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 SLC16A14Q7RTX9 510 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 DPPA2Q7Z7J5 298 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 LRRC75A-AS1Q8N1F1 130 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 DEPDC4Q8N2C3 294 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 LRRC18Q8N456 261 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 CPEB3Q8NE35 698 aaKnown RBP15.31■□□□□ 0.04
VPS52-214ENST00000463486 NUP37Q8NFH4 326 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 IL17RDQ8NFM7 739 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 GIPC3Q8TF64 312 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 NANOS1Q8WY41 292 aaKnown RBP15.31■□□□□ 0.04
VPS52-214ENST00000463486 TSSK2Q96PF2 358 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 SNX18Q96RF0 628 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 IFT27Q9BW83 186 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 GSX2Q9BZM3 304 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 NUAK2Q9H093 628 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 POLE4Q9NR33 117 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 ARMC1Q9NVT9 282 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.31■□□□□ 0.04
VPS52-214ENST00000463486 ATP23Q9Y6H3 246 aa15.31■□□□□ 0.04
VPS52-214ENST00000463486 IGLV1-36A0A0B4J1U3 117 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 OR6C68A6NDL8 312 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 ENTPD5O75356 428 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 TIPRLO75663 272 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 CST2P09228 141 aa15.3■□□□□ 0.04
VPS52-214ENST00000463486 ADAM8P78325 824 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms