RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 LIX1LQ8IVB5 337 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 GLB1L2Q8IW92 636 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 CNEP1R1Q8N9A8 125 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF610Q8N9Z0 462 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF511Q8NB15 262 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 PROKR2Q8NFJ6 384 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 NABP1Q96AH0 204 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 LGALS12Q96DT0 336 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 ZMYND19Q96E35 227 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-202ENST00000463060 BOD1Q96IK1 185 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 CRLF2Q9HC73 371 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 B3GAT2Q9NPZ5 323 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 CNOT2Q9NZN8 540 aaKnown RBP12.63□□□□□ -0.39
COL6A1-202ENST00000463060 JKAMPQ9P055 326 aa12.63□□□□□ -0.39
COL6A1-202ENST00000463060 SNTNA6NMZ2 147 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 CCL21O00585 134 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 MPZL1O95297 269 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 SBK2P0C263 348 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 PIPP12273 146 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-202ENST00000463060 GNLYP22749 145 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 CDAP32320 146 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 OPRM1P35372 400 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 BLVRAP53004 296 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 GLO1Q04760 184 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 CEACAM16Q2WEN9 425 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 TEX30Q5JUR7 227 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 Q6ZT83 130 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 GABRG1Q8N1C3 465 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 SGCDQ92629 289 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 NSMAFQ92636 917 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 RND1Q92730 232 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 RNFT2Q96EX2 444 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 ALKBH3Q96Q83 286 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-202ENST00000463060 RERGLQ9H628 205 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 ADGRL4Q9HBW9 690 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 FGF20Q9NP95 211 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-202ENST00000463060 ESPL1Q14674 2120 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 MYO7BQ6PIF6 2116 aa12.62□□□□□ -0.39
COL6A1-202ENST00000463060 EFCAB10A6NFE3 127 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 TVP23AA6NH52 213 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 ITGA5P08648 1049 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 HTR1AP08908 422 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 PSKH1P11801 424 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 MPGP29372 298 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 UQCRFS1P47985 274 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 MVKQ03426 396 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 RAB40BQ12829 278 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 FAPQ12884 760 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 KCTD21Q4G0X4 260 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 KLHL22Q53GT1 634 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 LCN1P1Q5VSP4 162 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF474Q6S9Z5 364 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-202ENST00000463060 OR52I1Q8NGK6 324 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 C11orf40Q8WZ69 217 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 FOXN4Q96NZ1 517 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF649Q9BS31 505 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 RBM24Q9BX46 236 aaKnown RBP12.61□□□□□ -0.39
COL6A1-202ENST00000463060 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-202ENST00000463060 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF696Q9H7X3 374 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 WDR76Q9H967 626 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 POLE4Q9NR33 117 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 UPB1Q9UBR1 384 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 MYRFQ9Y2G1 1151 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 TPRKBQ9Y3C4 175 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
COL6A1-202ENST00000463060 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 A0A1B0GUH1 482 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 A8MXE2 369 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF99A8MXY4 864 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 MSTNO14793 375 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 FAM20BO75063 409 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 IGHA1P01876 353 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 COX5AP20674 150 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 IGHV1-2P23083 117 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF84P51523 738 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 GABARAPL2P60520 117 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 RPS7P62081 194 aaKnown RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 LSM6P62312 80 aaKnown RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ARF1P84077 181 aaKnown RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ST3GAL4Q11206 333 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 POU4F2Q12837 409 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 FAM27BQ5VT28 67 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 SLC16A9Q7RTY1 509 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ABHD12BQ7Z5M8 362 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ATCAYQ86WG3 371 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 RELL2Q8NC24 303 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-202ENST00000463060 ZNF540Q8NDQ6 660 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 OR4F15Q8NGB8 312 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 OR6K6Q8NGW6 343 aa12.6□□□□□ -0.39
COL6A1-202ENST00000463060 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms