RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 OR2A4O95047 310 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 HLA-AP01891 365 aaKnown RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 CELA2BP08218 269 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 AKR1C4P17516 323 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 MAOAP21397 527 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 EIF2B5Q13144 721 aaKnown RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 C1orf61Q13536 156 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 C1QL3Q5VWW1 255 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 Q6ZSR6 202 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 ABHD13Q7L211 337 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 PM20D2Q8IYS1 436 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 CA13Q8N1Q1 262 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF563Q8TA94 476 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 PAQR8Q8TEZ7 354 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 ANKRD9Q96BM1 317 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 OR2A7Q96R45 310 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 STACQ99469 402 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 VRK1Q99986 396 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 TRIM2Q9C040 744 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 COMMD4Q9H0A8 199 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 CHRDQ9H2X0 955 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 HRASLS2Q9NWW9 162 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 GRHPRQ9UBQ7 328 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 MSRAQ9UJ68 235 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 MMP17Q9ULZ9 603 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 ERVK-19Q9WJR5 959 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 PHF3Q92576 2039 aaKnown RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 TMEM82A0PJX8 343 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 AGPAT2O15120 278 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 CTDSPLO15194 276 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 FADS1O60427 444 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 CTAG2O75638 210 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 DCNP07585 359 aaKnown RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 FGF2P09038 288 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 SPARCP09486 303 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 RAB40ALP0C0E4 278 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 MAOBP27338 520 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 EIF2B1Q14232 305 aaKnown RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 ALG10Q5BKT4 473 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 C3orf33Q6P1S2 294 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 TFAP2EQ6VUC0 442 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 KRT77Q7Z794 578 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 MARCH3Q86UD3 253 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
HDAC4-208ENST00000463007 RAB40AQ8WXH6 277 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 ZCCHC4Q9H5U6 513 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 OR2S2Q9NQN1 319 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 HAO2Q9NYQ3 351 aa11.25□□□□□ -0.61
HDAC4-208ENST00000463007 OR5H14A6NHG9 310 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR2AT4A6NND4 320 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 H7C417 338 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OIP5O43482 229 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 FOXS1O43638 330 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 GUSBP08236 651 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 TACSTD2P09758 323 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR4E1P0C645 316 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 AKAIN1P0CW23 69 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 CPN1P15169 458 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 S1PR1P21453 382 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 PSMD4P55036 377 aaKnown RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 GUCA2BQ16661 112 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 GLYATL3Q5SZD4 288 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 PRAMEF17Q5VTA0 474 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR52W1Q6IF63 320 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 ZCCHC12Q6PEW1 402 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 NRSN2Q9GZP1 204 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 MTFP1Q9UDX5 166 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 STEAP1Q9UHE8 339 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 FAM186AA6NE01 2351 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 URADA6NGE7 173 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 H7C2Y5 167 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 DNASE2O00115 360 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 GPRIN2O60269 458 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 EIF1AXP47813 144 aaKnown RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 ATP1B3P54709 279 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 ELFN2Q5R3F8 820 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 CLVS2Q5SYC1 327 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 HAGHLQ6PII5 290 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 SLC36A1Q7Z2H8 476 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 LRRTM1Q86UE6 522 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 CSNK1A1LQ8N752 337 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 OR2G2Q8NGZ5 317 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 SLC37A2Q8TED4 501 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 CCDC74AQ96AQ1 378 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 FAM3DQ96BQ1 224 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 ZNF578Q96N58 590 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 C8orf33Q9H7E9 229 aaPredicted RBP11.24□□□□□ -0.61
HDAC4-208ENST00000463007 ELOVL3Q9HB03 270 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 APMAPQ9HDC9 416 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 A0A0J9YY10 115 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 TCRBV21S2A2A0A5A6 115 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 C5orf51A6NDU8 294 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 C2orf74A8MZ97 194 aa11.24□□□□□ -0.61
HDAC4-208ENST00000463007 BET1O15155 118 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms