RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PTH2RP49190 550 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 HGFACQ04756 655 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 KRR1Q13601 381 aaKnown RBP13.74□□□□□ -0.21
ERCC3-206ENST00000462306 MICAQ29983 383 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 ZNF544Q6NX49 715 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 ZNF620Q6ZNG0 422 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 FOXL2NBQ6ZUU3 175 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 DPPA2Q7Z7J5 298 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 SPATA24Q86W54 205 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 ZNF584Q8IVC4 421 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 IL17RDQ8NFM7 739 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 PERPQ96FX8 193 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 LRMDAQ9H2I8 198 aa13.74□□□□□ -0.21
ERCC3-206ENST00000462306 MAP1AP78559 2803 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-206ENST00000462306 F8P00451 2351 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 IMPA2O14732 288 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 ARPC3O15145 178 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 PPP1R3DO95685 299 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 RAB36O95755 333 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 CST1P01037 141 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 ZNF35P13682 527 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 HOXB6P17509 224 aaKnown RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 NPR2P20594 1047 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 SLC6A6P31641 620 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 APOBEC3AP31941 199 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 FABP6P51161 128 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 RPS6KA3P51812 740 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 RAB39AQ14964 217 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 ETFDHQ16134 617 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 SGCAQ16586 387 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 AGAP6Q5VW22 663 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 PTCHD4Q6ZW05 846 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 SLC16A14Q7RTX9 510 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 ADCK1Q86TW2 530 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 TGIF2LYQ8IUE0 185 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 FBXL14Q8N1E6 418 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 MUC15Q8N387 334 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 LRRC18Q8N456 261 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 PAPD5Q8NDF8 572 aaKnown RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 WFDC11Q8NEX6 87 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 OR4F15Q8NGB8 312 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 SLCO4A1Q96BD0 722 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 ERMAPQ96PL5 475 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 MMADHCQ9H3L0 296 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 CA10Q9NS85 328 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 CBLN4Q9NTU7 201 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 VSX1Q9NZR4 365 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-206ENST00000462306 FBXL3Q9UKT7 428 aa13.73□□□□□ -0.21
ERCC3-206ENST00000462306 SOCS2O14508 198 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 SERPINA5P05154 406 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 CTLA4P16410 223 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 CDKN1AP38936 164 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 CDKN2AP42771 156 aaKnown RBP13.72□□□□□ -0.21
ERCC3-206ENST00000462306 ERFP50548 548 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 GK3PQ14409 553 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 MST1LQ2TV78 715 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 SLC36A2Q495M3 483 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 SHEQ5VZ18 495 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 TMEM179BQ7Z7N9 219 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 AQP11Q8NBQ7 271 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 NUP37Q8NFH4 326 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 GTPBP3Q969Y2 492 aaKnown RBP13.72□□□□□ -0.21
ERCC3-206ENST00000462306 FBXO17Q96EF6 278 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 DGCR6LQ9BY27 220 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 EGLN3Q9H6Z9 239 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 IL20Q9NYY1 176 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 CDH10Q9Y6N8 788 aa13.72□□□□□ -0.21
ERCC3-206ENST00000462306 FKBP6O75344 327 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 SCG5P05408 212 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 NR4A1P22736 598 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 LAP3P28838 519 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 ADIPOQQ15848 244 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 Q5PR19 223 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 TMEM53Q6P2H8 277 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 PRSS57Q6UWY2 283 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 RASSF6Q6ZTQ3 369 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 PLA2G12AQ9BZM1 189 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 RNF121Q9H920 327 aa13.71□□□□□ -0.21
ERCC3-206ENST00000462306 A0A1W2PPL8 197 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 BHLHE40O14503 412 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 IDH3BO43837 385 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 SLC16A7O60669 478 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 TP53P04637 393 aaPredicted RBP13.7□□□□□ -0.22
ERCC3-206ENST00000462306 CST2P09228 141 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 HIST1H1CP16403 213 aaKnown RBP13.7□□□□□ -0.22
ERCC3-206ENST00000462306 ZNF32P17041 273 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 THBS4P35443 961 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 ATP5J2P56134 94 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 CBX1P83916 185 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 DAG1Q14118 895 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 ENDOGQ14249 297 aaKnown RBP13.7□□□□□ -0.22
ERCC3-206ENST00000462306 SWI5Q1ZZU3 235 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 ASRGL1Q7L266 308 aa13.7□□□□□ -0.22
ERCC3-206ENST00000462306 OR10G2Q8NGC3 310 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms