RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 MYBPHQ13203 477 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 MED22Q15528 200 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF239Q16600 458 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 IQCCQ4KMZ1 466 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 LRRC23Q53EV4 343 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 CYBRD1Q53TN4 286 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 SERTAD4-AS1Q5TG53 156 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 C3orf33Q6P1S2 294 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 XKRXQ6PP77 449 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 TMPPEQ6ZT21 453 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 SLC46A3Q7Z3Q1 461 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 GCNT2Q8N0V5 402 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 FAM86B1Q8N7N1 296 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 ACBD4Q8NC06 268 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 VANGL1Q8TAA9 524 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 INTS12Q96CB8 462 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 STARD4Q96DR4 205 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 OR5B2Q96R09 309 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 KCTD14Q9BQ13 255 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 ARMC7Q9H6L4 198 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 ADA2Q9NZK5 511 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 AP3M1Q9Y2T2 418 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF175Q9Y473 711 aa7.07□□□□□ -1.28
ECHDC1-212ENST00000461239 INTS1Q8N201 2190 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 TACC2O95359 2948 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 A0A1W2PNV4 684 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CBY3A6NI87 242 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CPSF4LA6NMK7 179 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 HSPB2A8KAH6 182 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 FTCDNL1E5RQL4 147 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 FFAR1O14842 300 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 FMO6PO60774 539 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CLDN14O95500 239 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 PMS2P2O95744 297 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 SERPINA1P01009 418 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 PTNP21246 168 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 ME2P23368 584 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 EDNRAP25101 427 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CHRNB4P30926 498 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 SMSP52788 366 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CDH12P55289 794 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 RGS8P57771 180 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 MS4A2Q01362 244 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 LTBQ06643 244 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 BNIP1Q12981 228 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 HSPB2Q16082 182 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 ENTPD8Q5MY95 495 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 TMEM268Q5VZI3 342 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 GLYATQ6IB77 296 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF813Q6ZN06 617 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF771Q7L3S4 317 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CARM1Q86X55 608 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 EID3Q8N140 333 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 OR52E4Q8NGH9 312 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 RNF128Q8TEB7 428 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 ABHD3Q8WU67 409 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 SLC38A4Q969I6 547 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 MCHR1Q99705 422 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 PRSS27Q9BQR3 290 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF559Q9BR84 538 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 POTEKPQ9BYX7 375 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 C1orf21Q9H246 121 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 GORASP2Q9H8Y8 452 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CACYBPQ9HB71 228 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 MOV10Q9HCE1 1003 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 PLSCR4Q9NRQ2 329 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 SERINC1Q9NRX5 453 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CLEC4AQ9UMR7 237 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 SH3GLB1Q9Y371 365 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 HDGFL3Q9Y3E1 203 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CACNA1CQ13936 2221 aa7.06□□□□□ -1.28
ECHDC1-212ENST00000461239 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 A0A087WUJ7 227 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 GJE1A6NN92 205 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF716A6NP11 495 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 A8MVM7 634 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 CYTIPO60759 359 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 SS18L1O75177 396 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 PDE5AO76074 875 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 SEMG1P04279 462 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 HEXAP06865 529 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 TFPIP10646 304 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 EDN2P20800 178 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 BMP5P22003 454 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 CXCR1P25024 350 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 CLK1P49759 484 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 COPZ1P61923 177 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 SF3B4Q15427 424 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 SGCBQ16585 318 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 ALG10BQ5I7T1 473 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 SAMD4BQ5PRF9 694 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 C1orf140Q5VVS0 124 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 ZNF613Q6PF04 617 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 ULK3Q6PHR2 472 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 FCRLAQ7L513 359 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 CHMP1BQ7LBR1 199 aa7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 NUFIP2Q7Z417 695 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-212ENST00000461239 NKAIN4Q8IVV8 208 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms