RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 DCXRQ7Z4W1 244 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 APOBEC4Q8WW27 367 aaKnown RBP10.57□□□□□ -0.72
NPHP4-204ENST00000460696 ASB17Q8WXJ9 295 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 PHYHIPQ92561 330 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 FAM122AQ96E09 287 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 ST6GAL2Q96JF0 529 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 VSTM2LQ96N03 204 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 MMP25Q9NPA2 562 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 MED29Q9NX70 200 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 PILRAQ9UKJ1 303 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 RBM7Q9Y580 266 aaKnown RBP10.57□□□□□ -0.72
NPHP4-204ENST00000460696 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 LMO7DNF2Z398 122 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 F5H0A9 414 aaPredicted RBP10.57□□□□□ -0.72
NPHP4-204ENST00000460696 SPDEFO95238 335 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 LINC00271P0C7V0 271 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 DLX5P56178 289 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 BTG1P62324 171 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 PUDPQ08623 228 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 GRINAQ7Z429 371 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 MCEMP1Q8IX19 187 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 RNF170Q96K19 258 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 HTTP42858 3142 aa10.57□□□□□ -0.72
NPHP4-204ENST00000460696 ICE1Q9Y2F5 2266 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 MTCL1Q9Y4B5 1905 aaKnown RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 PRUNE2Q8WUY3 3088 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 FITM1A5D6W6 292 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 ANKRD34BA5PLL1 514 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 AIPO00170 330 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 IMPA2O14732 288 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SC5DO75845 299 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 HRGP04196 525 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 NR2C1P13056 603 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 HTR2CP28335 458 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 OTX2P32243 289 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 S100A10P60903 97 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 C1QL3Q5VWW1 255 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 OR10K2Q6IF99 312 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 STAC2Q6ZMT1 411 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 LANCL3Q6ZV70 420 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 OR2G2Q8NGZ5 317 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 DDOQ99489 341 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SLC19A3Q9BZV2 496 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 CST11Q9H112 138 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 CDCP1Q9H5V8 836 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 RABL2AQ9UBK7 228 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 RABL2BQ9UNT1 228 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 ZIC2O95409 532 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 DCTDP32321 178 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SLC22A6Q4U2R8 563 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 FAM198BQ6UWH4 519 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SLC22A18ASQ8N1D0 253 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF321PQ8N8H1 164 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 CHMP1AQ9HD42 196 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 OR2S2Q9NQN1 319 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 CTSFQ9UBX1 484 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 COPS3Q9UNS2 423 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 RNF215Q9Y6U7 377 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 F5H5P2 479 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 GABARAPH6UMI1 98 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 M0QYG6 137 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 GLULP15104 373 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 NME1P15531 152 aaKnown RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 P2RX1P51575 399 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 TAS2R20P59543 309 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 UBE2MP61081 183 aaKnown RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 UBE2IP63279 158 aaKnown RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 GPLD1P80108 840 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 ZNF658BQ4V348 819 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 COMMD7Q86VX2 200 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 BPIFB2Q8N4F0 458 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 TMEM105Q8N8V8 129 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SPERTQ8NA61 448 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 TM4SF19Q96DZ7 209 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 URM1Q9BTM9 101 aaKnown RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SARGQ9BW04 601 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 MRPS18AQ9NVS2 196 aaKnown RBP10.56□□□□□ -0.72
NPHP4-204ENST00000460696 SLCO1C1Q9NYB5 712 aa10.56□□□□□ -0.72
NPHP4-204ENST00000460696 TEX13DA0A0J9YY54 714 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-204ENST00000460696 ARPC3O15145 178 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 EIF4E2O60573 245 aaKnown RBP10.55□□□□□ -0.72
NPHP4-204ENST00000460696 CRTAPO75718 401 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-204ENST00000460696 IL33O95760 270 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 IGKV1D-16P01601 117 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 IGHV4-34P06331 123 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 ERCC1P07992 297 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-204ENST00000460696 TBXA2RP21731 343 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 CD34P28906 385 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 FOXL2P58012 376 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 CFAP77Q6ZQR2 320 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 OR6V1Q8N148 313 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 TAAR8Q969N4 342 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 FGGYQ96C11 551 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 LRFN3Q9BTN0 628 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 LAT2Q9GZY6 243 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 MFFQ9GZY8 342 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 FKRPQ9H9S5 495 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
NPHP4-204ENST00000460696 TP53P04637 393 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms