RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 APLNRP35414 380 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 UCP2P55851 309 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 TMEM33P57088 247 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 SELENOWP63302 87 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 HSF2Q03933 536 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 CD47Q08722 323 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 PCGF3Q3KNV8 242 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 ALG10Q5BKT4 473 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 ARPINQ7Z6K5 226 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 MICU2Q8IYU8 434 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 LRRC18Q8N456 261 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 CLDND2Q8NHS1 167 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 C11orf40Q8WZ69 217 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 LZICQ8WZA0 190 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 HDAC2Q92769 488 aaKnown RBP19.49■□□□□ 0.71
PTPN4-207ENST00000460162 NABP1Q96AH0 204 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 TPD52L3Q96J77 140 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 RACGAP1Q9H0H5 632 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 OR51B6Q9H340 312 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 CCNB1IP1Q9NPC3 277 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 HINT3Q9NQE9 182 aaKnown RBP19.49■□□□□ 0.71
PTPN4-207ENST00000460162 ZNF275Q9NSD4 429 aaPredicted RBP19.49■□□□□ 0.71
PTPN4-207ENST00000460162 A4GNTQ9UNA3 340 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 AP3M1Q9Y2T2 418 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 UGT2A1Q9Y4X1 527 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 ELOVL7A1L3X0 281 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 C17orf100A8MU93 164 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 RP2O75695 350 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 CLPTM1O96005 669 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 IGHMP01871 453 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 COL8A2P25067 703 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 ERVS71-1P61550 626 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 PABPC1L2AQ5JQF8 200 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 TMEM154Q6P9G4 183 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 GLCCI1Q86VQ1 547 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 OFCC1Q8IZS5 231 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 FNDC8Q8TC99 324 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 YIPF5Q969M3 257 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 BPIFA2Q96DR5 249 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 ALG12Q9BV10 488 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 C19orf24Q9BVV8 132 aa19.48■□□□□ 0.71
PTPN4-207ENST00000460162 IFI30P13284 250 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 MAGEB1P43366 347 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 FMODQ06828 376 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 TOP3AQ13472 1001 aaPredicted RBP19.47■□□□□ 0.71
PTPN4-207ENST00000460162 ALKBH6Q3KRA9 238 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 FAM205BPQ63HN1 556 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 RFLNBQ8N5W9 214 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 RCN3Q96D15 328 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 NKIRAS2Q9NYR9 191 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 ANK2Q01484 3957 aa19.47■□□□□ 0.71
PTPN4-207ENST00000460162 MT-ND5P03915 603 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 ZNF32P17041 273 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 CDAP32320 146 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 SRP14P37108 136 aaKnown RBP19.46■□□□□ 0.71
PTPN4-207ENST00000460162 RPL27P61353 136 aaKnown RBP19.46■□□□□ 0.71
PTPN4-207ENST00000460162 SF3A3Q12874 501 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTPN4-207ENST00000460162 LAPTM4AQ15012 233 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 MOGQ16653 247 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 ANKDD1AQ495B1 522 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 ICA1LQ8NDH6 482 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 CPEB3Q8NE35 698 aaKnown RBP19.46■□□□□ 0.71
PTPN4-207ENST00000460162 TSPAN32Q96QS1 320 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 NARFLQ9H6Q4 476 aa19.46■□□□□ 0.71
PTPN4-207ENST00000460162 IGKV1D-43A0A0B4J1Z2 117 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 PPIHO43447 177 aaKnown RBP19.45■□□□□ 0.7
PTPN4-207ENST00000460162 IFNW1P05000 195 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 STOMP27105 288 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 THEM4Q5T1C6 240 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 LIPNQ5VXI9 398 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 SLC25A47Q6Q0C1 308 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 UNQ6126/PRO20091Q6UXV3 157 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 OR1J1Q8NGS3 322 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 RP9Q8TA86 221 aaKnown RBP19.45■□□□□ 0.7
PTPN4-207ENST00000460162 NSMAFQ92636 917 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 CCDC134Q9H6E4 229 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 MAN2C1Q9NTJ4 1040 aa19.45■□□□□ 0.7
PTPN4-207ENST00000460162 IGHV3-13P01766 116 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 MSMBP08118 114 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 DRD4P21917 467 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 CCL8P80075 99 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 TEKQ02763 1124 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 TRAM2Q15035 370 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 FAM27BQ5VT28 67 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 RINLQ6ZS11 566 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 NRMQ8IXM6 262 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 LRRC75AQ8NAA5 344 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 GEMIN6Q8WXD5 167 aaKnown RBP19.44■□□□□ 0.7
PTPN4-207ENST00000460162 TMEM186Q96B77 213 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 POM121L2Q96KW2 1035 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 RBP7Q96R05 134 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 FNDC11Q9BVV2 318 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 CMTM6Q9NX76 183 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 ARMCX1Q9P291 453 aa19.44■□□□□ 0.7
PTPN4-207ENST00000460162 A6NIZ1 184 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 FAM157AC9JC47 383 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 TCF21O43680 179 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 GAAP10253 952 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 CCNOP22674 350 aa19.43■□□□□ 0.7
PTPN4-207ENST00000460162 SLC9A3P48764 834 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms