RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 APTXQ7Z2E3 356 aaKnown RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 NT5DC3Q86UY8 548 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 HIPK1Q86Z02 1210 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 ZNF547Q8IVP9 402 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 GID4Q8IVV7 300 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 HS3ST5Q8IZT8 346 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 SLC39A11Q8N1S5 342 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 NOXO1Q8NFA2 376 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 OR5B17Q8NGF7 314 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 OR5AK3PQ8NH89 298 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 LYPD6BQ8NI32 183 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 FAM172AQ8WUF8 416 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 AP3S1Q92572 193 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 MYDGFQ969H8 173 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 NTAN1Q96AB6 310 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 DGCR14Q96DF8 476 aaKnown RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 CENPNQ96H22 339 aaPredicted RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 MBOAT7Q96N66 472 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 ATOH8Q96SQ7 321 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 LGMNQ99538 433 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 RAB34Q9BZG1 259 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 ZYG11BQ9C0D3 744 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 NAA50Q9GZZ1 169 aaKnown RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 SLC22A4Q9H015 551 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 FAM107BQ9H098 131 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 DEFB129Q9H1M3 183 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 PORCNQ9H237 461 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 OR51M1Q9H341 326 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 ARMC7Q9H6L4 198 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 NHEJ1Q9H9Q4 299 aaPredicted RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 BEX1Q9HBH7 125 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 PARVBQ9HBI1 364 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 IL1RAPQ9NPH3 570 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 C12orf4Q9NQ89 552 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 EXD2Q9NVH0 621 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 FGFR1OP2Q9NVK5 253 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 PLEKHJ1Q9NW61 149 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 MUTYHQ9UIF7 546 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 ZNF221Q9UK13 617 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 YARS2Q9Y2Z4 477 aaKnown RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 MRPS18CQ9Y3D5 142 aaKnown RBP2.74□□□□□ -1.97
VPS8-215ENST00000460158 TAF1LQ8IZX4 1826 aa2.74□□□□□ -1.97
VPS8-215ENST00000460158 UBN2Q6ZU65 1347 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 IGHV3OR16-10A0A075B7F0 116 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 IGHV4-30-2A0A087WSY4 118 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 NSG1A0A0A6YYJ2 146 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 A0A1B0GUS0 222 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 A0A1W2PQL4 384 aaPredicted RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 FUOMA2VDF0 154 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 TCP10L2B9ZVM9 353 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 TMEM238C9JI98 176 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 H3BNH8 94 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 hCG_2039718K7EN88 272 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 EI24O14681 340 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 PPP1R2P9O14990 202 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 TNFSF12O43508 249 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 SNAP91O60641 907 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 CRLF1O75462 422 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 UGT2B17O75795 530 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 VAMP5O95183 116 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 FGF19O95750 216 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 ANGPTL1O95841 491 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 TSPAN13O95857 204 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 KLK1P06870 262 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 COX5BP10606 129 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 GATA1P15976 413 aaPredicted RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 HLA-GP17693 338 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 M6PRP20645 277 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 CMA1P23946 247 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 PSMB5P28074 263 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 COILP38432 576 aaPredicted RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 NSG1P42857 185 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 BDKRB1P46663 353 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 CSNK1A1P48729 337 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 DAP3P51398 398 aaKnown RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 OR2B8PP59922 312 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 ERVK-16P61578 105 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 RPS15AP62244 130 aaKnown RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 MRPS22P82650 360 aaKnown RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 ST3GAL3Q11203 375 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 STX4Q12846 297 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 PDIA2Q13087 525 aaKnown RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 KIAA0141Q14154 515 aaPredicted RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 EMC2Q15006 297 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 SPA17Q15506 151 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 UBE2V2Q15819 145 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 GABRA6Q16445 453 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 C3AR1Q16581 482 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 LPAL2Q16609 132 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 UPP1Q16831 310 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 PDZD11Q5EBL8 140 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 DCAF12Q5T6F0 453 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 OGFRL1Q5TC84 451 aaPredicted RBP2.73□□□□□ -1.97
VPS8-215ENST00000460158 LPCAT4Q643R3 524 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 ANKRD26P1Q6NSI1 321 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 ZNF343Q6P1L6 599 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 PNCKQ6P2M8 343 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 BTNL3Q6UXE8 466 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 MBOAT1Q6ZNC8 495 aa2.73□□□□□ -1.97
VPS8-215ENST00000460158 AHSA2Q719I0 299 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms