RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 ALX3O95076 343 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 VAMP5O95183 116 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 FBP1P09467 338 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 RAG2P55895 527 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 OR7E24Q6IFN5 339 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 VHLLQ6RSH7 139 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 PIWIL3Q7Z3Z3 882 aaKnown RBP8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 ZNF761Q86XN6 746 aaPredicted RBP8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 LGI3Q8N145 548 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 SCCPDHQ8NBX0 429 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 UBTD2Q8WUN7 234 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 DUS3LQ96G46 650 aaKnown RBP8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 DCBLD2Q96PD2 775 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 PRDM9Q9NQV7 894 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 TRDV1A0A1B0GX56 115 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 CACNG3O60359 315 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 RAD52P43351 418 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 ZP2Q05996 745 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 PGBD5Q8N414 524 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 LCORQ96JN0 433 aaPredicted RBP8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 FAM96BQ9Y3D0 163 aa8.21□□□□□ -1.09
SHROOM4-203ENST00000460112 CACNA1EQ15878 2313 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ARID2Q68CP9 1835 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SERINC4A6NH21 518 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 OR6C76A6NM76 312 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SCO1O75880 301 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 CAPNS1P04632 268 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 KCNJ10P78508 379 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 TFAP2EQ6VUC0 442 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ENTHD1Q8IYW4 607 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 LMNTD1Q8N9Z9 388 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ASIC5Q9NY37 505 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 PURGQ9UJV8 347 aaKnown RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 JTBO76095 146 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SORBS2O94875 1100 aaKnown RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SLC5A2P31639 672 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 CDKN3Q16667 212 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 MRPL2Q5T653 305 aaKnown RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ZNF646O15015 1829 aaPredicted RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 GBF1Q92538 1859 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 POM121CA8CG34 1229 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SH2D1BO14796 132 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 CEBPBP17676 345 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 DUSP1P28562 367 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ZNF93P35789 620 aaPredicted RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 RFC3P40938 356 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 APOBEC1P41238 236 aaKnown RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 MRPL19P49406 292 aaKnown RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SIX1Q15475 284 aaPredicted RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 VAMP3Q15836 100 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 OR6M1Q8NGM8 313 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ST8SIA2Q92186 375 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 EDAQ92838 391 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ZNF582Q96NG8 517 aaPredicted RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 ALG12Q9BV10 488 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SLC35D1Q9NTN3 355 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 OBP2AQ9NY56 170 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 PHF1O43189 567 aaPredicted RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 SULT1C4O75897 302 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 DDOSTP39656 456 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 PSMB10P40306 273 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 GPR12P47775 334 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 EDDM3BP56851 147 aa8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 EBPQ15125 230 aaKnown RBP8.21□□□□□ -1.1
SHROOM4-203ENST00000460112 PRRG2O14669 202 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ASAH1Q13510 395 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 EXOSC7Q15024 291 aaKnown RBP8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 OR8G1Q15617 311 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 IGSF11Q5DX21 431 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 RTP2Q5QGT7 225 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 DOK3Q7L591 496 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 OR52H1Q8NGJ2 320 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 OR52N1Q8NH53 320 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 S1PR3Q99500 378 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ACPTQ9BZG2 426 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 RYDENQ9NUL5 291 aaKnown RBP8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 TMEM129A0AVI4 362 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ACKR3P25106 362 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ABCD3P28288 659 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 HOXA11P31270 313 aaPredicted RBP8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 RAB1AP62820 205 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 BAMBIQ13145 260 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 SQSTM1Q13501 440 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ISL2Q96A47 359 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 HES7Q9BYE0 225 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 SLCO3A1Q9UIG8 710 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 OR2F2O95006 317 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ADRA2CP18825 462 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 PPP1CAP62136 330 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 SIRPAP78324 504 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 OR2F1Q13607 317 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 LETMD1Q6P1Q0 360 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 ZNF251Q9BRH9 671 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 NMES1Q9C002 83 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 DLL4Q9NR61 685 aa8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 RGPD3A6NKT7 1758 aaPredicted RBP8.2□□□□□ -1.1
SHROOM4-203ENST00000460112 RGPD4Q7Z3J3 1758 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms