RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 CMTM7Q96FZ5 175 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 TRIB3Q96RU7 358 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 PRRT1Q99946 306 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 B9D2Q9BPU9 175 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 MLPHQ9BV36 600 aaPredicted RBP-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 FAIM2Q9BWQ8 316 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 TBC1D10AQ9BXI6 508 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 GBA3Q9H227 469 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 DPH5Q9H2P9 285 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 TDRD3Q9H7E2 651 aaKnown RBP-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 GPN2Q9H9Y4 310 aaPredicted RBP-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 NUDT15Q9NV35 164 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 AATFQ9NY61 560 aaKnown RBP eCLIP-0.84□□□□□ -2.541e-323■■■■■ 60.9
SNORD42B-201ENST00000458893 CALYQ9NYX4 217 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 NFKBIL1Q9UBC1 381 aaPredicted RBP-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 SEC14L3Q9UDX4 400 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 NARFQ9UHQ1 456 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 ZNF490Q9ULM2 529 aaPredicted RBP-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 STAP1Q9ULZ2 295 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 SLC22A7Q9Y694 548 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 POLEQ07864 2286 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 FAM208BQ5VWN6 2430 aa-0.84□□□□□ -2.54
SNORD42B-201ENST00000458893 BDP1A6H8Y1 2624 aa-0.85□□□□□ -2.54
SNORD42B-201ENST00000458893 BAZ2AQ9UIF9 1905 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 A0A087WV48 116 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 A0A087WZY1 265 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 LOC102724200A0A096LPH7 203 aaPredicted RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TMEM89A2RUT3 159 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 OR6C74A6NCV1 312 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 ARHGAP42A6NI28 874 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 OR5H1A6NKK0 313 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 ZNF726A6NNF4 738 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 B4E171 279 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 GPR89AB7ZAQ6 455 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 F5H5T6 163 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 GEMIN2O14893 280 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 SH3BP5O60239 455 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 BEST1O76090 585 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 GH1P01241 217 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 GPR89BP0CG08 455 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 GSTT2P0CG29 244 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 GSTT2BP0CG30 244 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 MAPK3P27361 379 aaPredicted RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 MPIP34949 423 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 RORAP35398 523 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 PCK1P35558 622 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TSPAN7P41732 249 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 UBE2NP61088 152 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 MRPL28Q13084 256 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 SPP2Q13103 211 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 ILKQ13418 452 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 SURF2Q15527 256 aaPredicted RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TMEM52BQ4KMG9 183 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 C1orf141Q5JVX7 400 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 MLIPQ5VWP3 458 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 METTL21CQ5VZV1 264 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 H3F3CQ6NXT2 135 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 NEK5Q6P3R8 708 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TMEM270Q6UE05 265 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 ERN2Q76MJ5 926 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 VPS36Q86VN1 386 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TPRA1Q86W33 373 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 CDR2LQ86X02 465 aaPredicted RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 ERO1BQ86YB8 467 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 STHQ8IWL8 128 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 CPXCR1Q8N123 301 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 NUP93Q8N1F7 819 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 STKLD1Q8NE28 680 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 OR5C1Q8NGR4 320 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 ZNRF2Q8NHG8 242 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 PATE1Q8WXA2 126 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 HTR3CQ8WXA8 447 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 DNASE1L2Q92874 299 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 RBPMSQ93062 196 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 NTAN1Q96AB6 310 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 RAD51AP1Q96B01 352 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TMEM45BQ96B21 275 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 TBATAQ96M53 351 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 PANX3Q96QZ0 392 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 OR8B2Q96RD0 313 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 PANX2Q96RD6 677 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 NDUFAF3Q9BU61 184 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 OSBPL8Q9BZF1 889 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 NACA2Q9H009 215 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 RPAP3Q9H6T3 665 aaPredicted RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 VSIRQ9H7M9 311 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 SRD5A3Q9H8P0 318 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 MRPL47Q9HD33 250 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 OR2S2Q9NQN1 319 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 UTP6Q9NYH9 597 aaKnown RBP-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 UNC79Q9P2D8 2635 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 CYTH4Q9UIA0 394 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 RWDD2AQ9UIY3 292 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 COPS3Q9UNS2 423 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 DYSFO75923 2080 aa-0.85□□□□□ -2.55
SNORD42B-201ENST00000458893 DENND4BO75064 1496 aaPredicted RBP-0.86□□□□□ -2.55
SNORD42B-201ENST00000458893 A0A0B4J2A0 478 aa-0.86□□□□□ -2.55
SNORD42B-201ENST00000458893 IGKV1D-13A0A0B4J2D9 117 aa-0.86□□□□□ -2.55
SNORD42B-201ENST00000458893 IGHV2-70DA0A0C4DH43 119 aa-0.86□□□□□ -2.55
SNORD42B-201ENST00000458893 TRBV6-5A0A0K0K1A5 114 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms