RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 UNQ6126/PRO20091Q6UXV3 157 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 FITM2Q8N6M3 262 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 ARIH2OSQ8N7S6 290 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 OR10H5Q8NGA6 315 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 NSMAFQ92636 917 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 HDAC2Q92769 488 aaKnown RBP15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 FAM46AQ96IP4 442 aaKnown RBP15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 C7orf34Q96L11 122 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 TSPAN32Q96QS1 320 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 MUC13Q9H3R2 512 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 CDH20Q9HBT6 801 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 DYNLRB1Q9NP97 96 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 TMCC3Q9ULS5 477 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 V9GYQ6 96 aa15.15■□□□□ 0.02
SCARNA2-201ENST00000458748 NDUFS8O00217 210 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 GADD45GO95257 159 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 SLC2A10O95528 541 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 STAMBPO95630 424 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 APLNRP35414 380 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 LSM11P83369 360 aaKnown RBP eCLIP15.14■□□□□ 0.01not detected■■■□□ 17
SCARNA2-201ENST00000458748 VLDLRP98155 873 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 SPIBQ01892 262 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 SGCAQ16586 387 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 GPR139Q6DWJ6 353 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 IGFN1Q86VF2 1251 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 ALDH16A1Q8IZ83 802 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 LRRC18Q8N456 261 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 LRRC75AQ8NAA5 344 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 ZNF519Q8TB69 540 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 NEU4Q8WWR8 484 aaPredicted RBP15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 ZNF75AQ96N20 296 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 GPR160Q9UJ42 338 aa15.14■□□□□ 0.01
SCARNA2-201ENST00000458748 INAFM1C9JVW0 142 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 CDC42EP2O14613 210 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 SNAP29O95721 258 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 PATE4P0C8F1 98 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 RAD52P43351 418 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 PDLIM4P50479 330 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 ERVK-25P63136 954 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 SLC25A47Q6Q0C1 308 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 MEX3DQ86XN8 651 aaKnown RBP15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 PRIMA1Q86XR5 153 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 SVOPLQ8N434 492 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 ZNF525Q8N782 197 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 FAM86B1Q8N7N1 296 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 ZNF540Q8NDQ6 660 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 OR52J3Q8NH60 311 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 MRPL24Q96A35 216 aaKnown RBP15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 DHRS1Q96LJ7 313 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 ZNF570Q96NI8 536 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 WACQ9BTA9 647 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 MS4A5Q9H3V2 200 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 IL1RAPQ9NPH3 570 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 ACTR3BQ9P1U1 418 aa15.13■□□□□ 0.01
SCARNA2-201ENST00000458748 UNC119BA6NIH7 251 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 KRT36O76013 467 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 DIRAS1O95057 198 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 CST2P09228 141 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 MSX2P35548 267 aaPredicted RBP15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 RPS6KA3P51812 740 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 FMODQ06828 376 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 FAM27BQ5VT28 67 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 TSEN54Q7Z6J9 526 aaKnown RBP15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 ZNF584Q8IVC4 421 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 C1orf174Q8IYL3 243 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 LINC00471Q8N535 108 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 HTRA1Q92743 480 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 NMD3Q96D46 503 aaKnown RBP15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 RSRC1Q96IZ7 334 aaKnown RBP15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 SORCS2Q96PQ0 1159 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 DOK1Q99704 481 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 PIMREGQ9BSJ6 248 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 BCL2L14Q9BZR8 327 aa15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 EIF3KQ9UBQ5 218 aaKnown RBP15.12■□□□□ 0.01
SCARNA2-201ENST00000458748 IGHV4-30-2A0A087WSY4 118 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 TRBV4-1A0A0J9YWV2 114 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 A0A1W2PPL8 197 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 LOC390937A0A1W2PQ73 354 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 SH3PXD2BA1X283 911 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 C12orf71A8MTZ7 269 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 M0R233 179 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 SYNGR3O43761 229 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 OR10H3O60404 316 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 SEMG1P04279 462 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 MSR1P21757 451 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 FUT4P22083 530 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 SDHAP31040 664 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 CDAP32320 146 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 OMPP47874 163 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 LIMS1P48059 325 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 KRTAP1-1Q07627 177 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 FHL1Q13642 323 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 MOGQ16653 247 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 RGS7BPQ6MZT1 257 aaPredicted RBP15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 SMARCD3Q6STE5 483 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 DPY19L2P2Q6ZN68 376 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 SYT9Q86SS6 491 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 ADCK1Q86TW2 530 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 ZDHHC21Q8IVQ6 265 aa15.11■□□□□ 0.01
SCARNA2-201ENST00000458748 FGFBP3Q8TAT2 258 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms