RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 NR1H2P55055 460 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 KRTAP10-9P60411 292 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 GINS1Q14691 196 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 SLC27A4Q6P1M0 643 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 ZBTB46Q86UZ6 589 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 OR6V1Q8N148 313 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 SLC37A3Q8NCC5 494 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 FGFBP3Q8TAT2 258 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 STMN2Q93045 179 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 TSSK2Q96PF2 358 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 RBM4Q9BWF3 364 aaKnown RBP12.32□□□□□ -0.44
SMPD4-215ENST00000457039 C1QTNF6Q9BXI9 259 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 SLC25A19Q9HC21 320 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 CMC2Q9NRP2 79 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 KRT84Q9NSB2 600 aa12.32□□□□□ -0.44
SMPD4-215ENST00000457039 TACC2O95359 2948 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 ITPR2Q14571 2701 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 IGLV1-36A0A0B4J1U3 117 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 RENP00797 406 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 SCG5P05408 212 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 CBR1P16152 277 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 CD40P25942 277 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 POU1F1P28069 291 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 CRABP1P29762 137 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 ZNF83P51522 516 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 ESRRGP62508 458 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 FAM27BQ5VT28 67 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 MDP1Q86V88 176 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 CDC20BQ86Y33 519 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 CIB1Q99828 191 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 RBM4BQ9BQ04 359 aaKnown RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 NMNAT2Q9BZQ4 307 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 RACGAP1Q9H0H5 632 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 CLEC4MQ9H2X3 399 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 FN3KQ9H479 309 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 ESRP2Q9H6T0 727 aaKnown RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 MOV10Q9HCE1 1003 aaKnown RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 POLE4Q9NR33 117 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 USE1Q9NZ43 259 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 KLHL21Q9UJP4 597 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 B9D1Q9UPM9 204 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 COA3Q9Y2R0 106 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-215ENST00000457039 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 ABCA4P78363 2273 aa12.31□□□□□ -0.44
SMPD4-215ENST00000457039 IGHV1-18A0A0C4DH31 117 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 EI24O14681 340 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 UBL3O95164 117 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 PLAUP00749 431 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 ALPLP05186 524 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 PATE4P0C8F1 98 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 GAAP10253 952 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 IGFBP5P24593 272 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 PTAFRP25105 342 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 LAP3P28838 519 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 EPHA2P29317 976 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 CAPZA2P47755 286 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 ELF3P78545 371 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 DBPQ10586 325 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 DAG1Q14118 895 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 CRMP1Q14194 572 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 PTGES3Q15185 160 aaKnown RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 DNM1P34Q6PK57 102 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 TMEM108Q6UXF1 575 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 DPPA2Q7Z7J5 298 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 MYPOPQ86VE0 399 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 TMEM200AQ86VY9 491 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 GLB1L2Q8IW92 636 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 SLC38A2Q96QD8 506 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 GABARAPL3Q9BY60 117 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 PLEKHF2Q9H8W4 249 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 SEC61A2Q9H9S3 476 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 RPRD1BQ9NQG5 326 aaKnown RBP12.3□□□□□ -0.44
SMPD4-215ENST00000457039 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
SMPD4-215ENST00000457039 A0A1W2PPL8 197 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 M0R1B8 84 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 SURF4O15260 269 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 BAG2O95816 211 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 IFNGP01579 166 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 HMGN1P05114 100 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 CD3EP07766 207 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 CELA3BP08861 270 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 CST2P09228 141 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 CECR9P0C854 216 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 CD79AP11912 226 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 ZNF14P17017 642 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-215ENST00000457039 MSR1P21757 451 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 ARR3P36575 388 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 ALDH3A2P51648 485 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 SLC25A1P53007 311 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 RAB1AP62820 205 aa12.29□□□□□ -0.44
SMPD4-215ENST00000457039 PIGFQ07326 219 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms