RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 GNB5O14775 395 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC28A2O43868 658 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 C1orf105O95561 183 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 IL5P05113 134 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CTSLP07711 333 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 GABRR2P28476 465 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 MC3RP41968 323 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SIRPAP78324 504 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ZNF260Q3ZCT1 412 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 KHDC3LQ587J8 217 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 AWAT1Q58HT5 328 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 DRAM2Q6UX65 266 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LRRC70Q7Z2Q7 622 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CD163Q86VB7 1156 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC43A2Q8N370 569 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4E2Q8NGC2 313 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4K13Q8NH42 304 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SOCS4Q8WXH5 440 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 TCEAL3Q969E4 200 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 RAD51AP1Q96B01 352 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 NMNAT3Q96T66 252 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 GAREM1Q9H706 876 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 A4GALTQ9NPC4 353 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CMC2Q9NRP2 79 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 TRPC4Q9UBN4 977 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CCL26Q9Y258 94 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 USP9XQ93008 2570 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CSPG4Q6UVK1 2322 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LOC101059948A0A1B0GTJ6 334 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 DAPL1A0PJW8 107 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4C45A6NMZ5 311 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 F5H0A9 414 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 HRKO00198 91 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 APBA3O96018 575 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 RPN2P04844 631 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 IFNA4P05014 189 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 IRF1P10914 325 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ZBTB25P24278 435 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 NDUFS1P28331 727 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 PPP1CCP36873 323 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 MRPS11P82912 194 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LTBQ06643 244 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 C11orf87Q6NUJ2 197 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 STAC2Q6ZMT1 411 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SPATA2LQ8IUW3 424 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 RNF113BQ8IZP6 322 aaKnown RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 C17orf78Q8N4C9 275 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 UBAC2Q8NBM4 344 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 OR10H5Q8NGA6 315 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 OR4N2Q8NGD1 307 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 OR1J4Q8NGS1 313 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 C5orf34Q96MH7 638 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LRRC3BQ96PB8 259 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 LYSMD1Q96S90 227 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 IFT27Q9BW83 186 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SUCNR1Q9BXA5 334 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ZDHHC5Q9C0B5 715 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 BHLHE41Q9C0J9 482 aaPredicted RBP4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 ZDHHC3Q9NYG2 299 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 CES1P1Q9UKY3 287 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 SLC22A13Q9Y226 551 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 NBEAL2Q6ZNJ1 2754 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 PTPN13Q12923 2485 aa4.09□□□□□ -1.75
DEPDC1-202ENST00000456315 A6NNC1 897 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 SNRPGP15A8MWD9 76 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 SULT1B1O43704 296 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 FBXO24O75426 580 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 AIFM1O95831 613 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 RHOCP08134 193 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 CD14P08571 375 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 EDN3P14138 238 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 CDKN2AP42771 156 aaKnown RBP4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 RHOAP61586 193 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 SSPNQ14714 243 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 TCEA2Q15560 299 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 SP5Q6BEB4 398 aaPredicted RBP4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 LRRC69Q6ZNQ3 347 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 CXXC5Q7LFL8 322 aaKnown RBP4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 PRSS58Q8IYP2 241 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 SVBPQ8N300 66 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 OR7G2Q8NG99 324 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 OR9A1PQ8NGU1 263 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 BRIX1Q8TDN6 353 aaKnown RBP4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 TNFAIP8L1Q8WVP5 186 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 ERGIC1Q969X5 290 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM106AQ96A25 262 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 LGR4Q9BXB1 951 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 RHOFQ9HBH0 211 aa4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPS18BQ9Y676 258 aaKnown RBP4.09□□□□□ -1.76
DEPDC1-202ENST00000456315 TRBV2A0A0J9YWF9 115 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A1B0GV50 99 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM72A0PK05 275 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CTDSPLO15194 276 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 CTAG2O75638 210 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 RGS9O75916 674 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 PAK4O96013 591 aaPredicted RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 S100PP25815 95 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 THBS4P35443 961 aa4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 EIF2B1Q14232 305 aaKnown RBP4.08□□□□□ -1.76
DEPDC1-202ENST00000456315 C1QL3Q5VWW1 255 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 302.2 ms