RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 IST1P53990 364 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ATP12AP54707 1039 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PRRX1P54821 245 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PSMD4P55036 377 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 RPS18P62269 152 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 EEF1A1P68104 462 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 UBE2V1Q13404 147 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NPTX1Q15818 432 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 EXT1Q16394 746 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NNATQ16517 81 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ACKR1Q16570 336 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NRF1Q16656 503 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZSWIM7Q19AV6 140 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CTU2Q2VPK5 515 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TMEM41BQ5BJD5 291 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 DCST1Q5T197 706 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PDZK1Q5T2W1 519 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TBPL2Q6SJ96 375 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 C16orf47Q6ZP98 133 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NDUFAF7Q7L592 441 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TMEM179BQ7Z7N9 219 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 MEX3DQ86XN8 651 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 LACC1Q8IV20 430 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 SLC34A3Q8N130 599 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 SVOPLQ8N434 492 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CBR4Q8N4T8 237 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PACRGLQ8N7B6 248 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ICA1LQ8NDH6 482 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CATSPER1Q8NEC5 780 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 FAM71CQ8NEG0 241 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR5L2Q8NGL0 311 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR6T1Q8NGN1 323 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR4C3Q8NH37 302 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR8K3Q8NH51 312 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR5K1Q8NHB7 308 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 AKR7LQ8NHP1 331 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NUBPLQ8TB37 319 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 M1APQ8TC57 530 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 EME1Q96AY2 570 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 DAZAP1Q96EP5 407 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 NRBF2Q96F24 287 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ADOQ96SZ5 270 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 SECISBP2Q96T21 854 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 EPYCQ99645 322 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 GPA33Q99795 319 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ARHGDIGQ99819 225 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CIB1Q99828 191 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 C9orf16Q9BUW7 83 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 DEFB126Q9BYW3 111 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 HOXD1Q9GZZ0 328 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 VCX3BQ9H321 246 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 DPAGT1Q9H3H5 408 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TOR3AQ9H497 397 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 TRIM45Q9H8W5 580 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 RAB9BQ9NP90 201 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ASCL3Q9NQ33 180 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ACER3Q9NUN7 267 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 KLHL28Q9NXS3 571 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 CNOT2Q9NZN8 540 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 MRTO4Q9UKD2 239 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF443Q9Y2A4 671 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 SLC9A8Q9Y2E8 581 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 FAM32AQ9Y421 112 aaKnown RBP4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 ALPK2Q86TB3 2170 aa4.63□□□□□ -1.67
HMGB1P4-201ENST00000455362 PIEZO2Q9H5I5 2752 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 DCHS1Q96JQ0 3298 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 TRBV5-7A0A0A0MS05 114 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 NSG1A0A0A6YYJ2 146 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 SERINC4A6NH21 518 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 G3V2T6 193 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 TNFRSF11BO00300 401 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 WWP2O00308 870 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 DLGAP1O14490 977 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 SOCS2O14508 198 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 RRHO14718 337 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 MPPED1O15442 326 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 FADS1O60427 444 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF354AO60765 605 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 BCAS1O75363 584 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 E2F6O75461 281 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 SPDEFO95238 335 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 UTS2O95399 124 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 NADKO95544 446 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 NGFRP08138 427 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 ICAM2P13598 275 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF23P17027 643 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 NAGAP17050 411 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 TBXA2RP21731 343 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 PRKACGP22612 351 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 RRM2P31350 389 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 CDX1P47902 265 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF136P52737 540 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 AQP4P55087 323 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 ATP5IP56385 69 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 SMIM11AP58511 58 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 LINC00310P59036 64 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 PSPHP78330 225 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 HOXC5Q00444 222 aa4.62□□□□□ -1.67
HMGB1P4-201ENST00000455362 HSF2Q03933 536 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms