RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 PTDSS1P48651 473 aaKnown RBP12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 CDC42P60953 191 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 LCN6P62502 163 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 GLO1Q04760 184 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 CRMP1Q14194 572 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 DAZAP2Q15038 168 aaPredicted RBP12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 TAB1Q15750 504 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 SNAPC1Q16533 368 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 C3orf36Q3SXR2 165 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 FAM27BQ5VT28 67 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 C12orf73Q69YU5 71 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 WDR31Q8NA23 367 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 SDR9C7Q8NEX9 313 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 NELFAQ9H3P2 528 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 RPRD1BQ9NQG5 326 aaKnown RBP12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 MOKQ9UQ07 419 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC25A15Q9Y619 301 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 ICE1Q9Y2F5 2266 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 DOPEY2Q9Y3R5 2298 aa12.52□□□□□ -0.4
HMGXB4-204ENST00000455359 IGKV1D-43A0A0B4J1Z2 117 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 H0YJX3 145 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 HRGP04196 525 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 B4GALT1P15291 398 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 MSR1P21757 451 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 CRYGSP22914 178 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 EPHA2P29317 976 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 PCBD1P61457 104 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 EFNB1P98172 346 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 PPA1Q15181 289 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 KCNMB1Q16558 191 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 SLC36A2Q495M3 483 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 LPCAT4Q643R3 524 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 SYT9Q86SS6 491 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 OR8J1Q8NGP2 316 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 LINC01560Q8TB33 94 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 NSMAFQ92636 917 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 KCNN2Q9H2S1 579 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 TOR3AQ9H497 397 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 CRIM1Q9NZV1 1036 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 HECTD1Q9ULT8 2610 aa12.52□□□□□ -0.41
HMGXB4-204ENST00000455359 A0A096LPE4 126 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 A0A1W2PPZ6 126 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 PRR23D1E9PI22 279 aaPredicted RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 SLC16A6O15403 523 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 UBL3O95164 117 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 ATP6V1G2O95670 118 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 THBDP07204 575 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 CST2P09228 141 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 PRR23D2P0DMB1 279 aaPredicted RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 ARR3P36575 388 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 POLR2IP36954 125 aaKnown RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 NR1H2P55055 460 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 LRRC36Q1X8D7 754 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 CYB561A3Q8NBI2 242 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 PTP4A1Q93096 173 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 NABP1Q96AH0 204 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 MBOAT4Q96T53 435 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 PITX2Q99697 317 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 SEC61A2Q9H9S3 476 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 SRA1Q9HD15 236 aaKnown RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 NDRG4Q9ULP0 352 aaKnown RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 COA3Q9Y2R0 106 aaPredicted RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 FLNBO75369 2602 aaKnown RBP12.51□□□□□ -0.41
HMGXB4-204ENST00000455359 C12orf71A8MTZ7 269 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 DCTN6O00399 190 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 PRODHO43272 600 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 MPZL2O60487 215 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 SNAP29O95721 258 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 GAAP10253 952 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 CBR1P16152 277 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 SPI1P17947 270 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 GGT2P36268 569 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 HSF2Q03933 536 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 KEAP1Q14145 624 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 ETFDHQ16134 617 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 SGCAQ16586 387 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 BEX5Q5H9J7 111 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 SLC35D3Q5M8T2 416 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 SLC25A30Q5SVS4 291 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 TTC23Q5W5X9 447 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 SLC16A14Q7RTX9 510 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 GALNT4Q8N4A0 578 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 PROKR2Q8NFJ6 384 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 TSSK2Q96PF2 358 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 RASSF4Q9H2L5 321 aa12.5□□□□□ -0.41
HMGXB4-204ENST00000455359 IMPAD1Q9NX62 359 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms