RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 HOXB9P17482 250 aaPredicted RBP6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 GPX2P18283 190 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ADRA2CP18825 462 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 DAP3P51398 398 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF81P51508 661 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 NPTX1Q15818 432 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ALKBH6Q3KRA9 238 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 LINC00114Q6XXX2 140 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 NANOGNBQ7Z5D8 188 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ZER1Q7Z7L7 766 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 LSRQ86X29 649 aaPredicted RBP6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 C11orf65Q8NCR3 313 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ICA1LQ8NDH6 482 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 OR4K5Q8NGD3 323 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 RASSF5Q8WWW0 418 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 POP5Q969H6 163 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 SPDL1Q96EA4 605 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 OR52B2Q96RD2 323 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 SLC6A7Q99884 636 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 SH3GL3Q99963 347 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF747Q9BV97 191 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 RABEP2Q9H5N1 569 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 CCNB1IP1Q9NPC3 277 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 SLC25A37Q9NYZ2 338 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 ZDHHC8Q9ULC8 765 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 TRIM33Q9UPN9 1127 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 WIPI2Q9Y4P8 454 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 USH1CQ9Y6N9 552 aa6.83□□□□□ -1.32
NIF3L1-209ENST00000454952 TANC2Q9HCD6 1990 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 TRAPPC13A5PLN9 417 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 CH25HO95992 272 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 CLPTM1O96005 669 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ADH4P08319 380 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 PATE4P0C8F1 98 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 HKR1P10072 659 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 UMPSP11172 480 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 CPT2P23786 658 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 STOMP27105 288 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 AQP1P29972 269 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 GUCA1AP43080 201 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ATP4BP51164 291 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ARHGDIAP52565 204 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 UBA52P62987 128 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 MRPS34P82930 218 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 HIST3H3Q16695 136 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 TSTQ16762 297 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ARMCX4Q5H9R4 360 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ENTPD8Q5MY95 495 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 INTS11Q5TA45 600 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 MBNL2Q5VZF2 373 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ARL9Q6T311 187 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 EPGNQ6UW88 154 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 WDR88Q6ZMY6 472 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 C1orf229Q6ZS94 237 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 PATL1Q86TB9 770 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 COMTD1Q86VU5 262 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 PAQR4Q8N4S7 273 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 SPICQ8N5J4 248 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 SYT14Q8NB59 555 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 NOXO1Q8NFA2 376 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 OR1J1Q8NGS3 322 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 FGFBP3Q8TAT2 258 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 FNDC8Q8TC99 324 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 CCL17Q92583 94 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 MCHR2Q969V1 340 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 ARHGDIGQ99819 225 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 OR51B6Q9H340 312 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 SIAEQ9HAT2 523 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 SMURF2Q9HAU4 748 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 TAS2R5Q9NYW4 299 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 VAPAQ9P0L0 249 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
NIF3L1-209ENST00000454952 TRBV5-3A0A0A0MS03 114 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 ISPDA4D126 451 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 HTR3EA5X5Y0 456 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 NPIPB13A6NJU9 1138 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 CPSF4LA6NMK7 179 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 NPIPB4C9JG80 1138 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 LRRN3E7EW58 273 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 M0R3H8 397 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 TPST2O60704 377 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 FSHBP01225 129 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 IGF2P01344 180 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 CD55P08174 381 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 MMP7P09237 267 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 ASAH2BP0C7U1 165 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 CCL2P13500 99 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 CD33P20138 364 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 CD247P20963 164 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 CCNOP22674 350 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 TUBG1P23258 451 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 TNFSF4P23510 183 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 PRTN3P24158 256 aa6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 RBM34P42696 430 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 GDI2P50395 445 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF133P52736 654 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-209ENST00000454952 PCBP3P57721 371 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms