RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 HS3ST1O14792 307 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 NR2C1P13056 603 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 NOS3P29474 1203 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 GRK5P34947 590 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 ARF1P84077 181 aaKnown RBP12.8□□□□□ -0.36
VPS16-205ENST00000453689 GINS1Q14691 196 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 LRRC36Q1X8D7 754 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 C1QTNF12Q5T7M4 302 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 ADAM5Q6NVV9 412 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 ANKRD16Q6P6B7 361 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 KLHL24Q6TFL4 600 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 C20orf204Q6ZNR8 217 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 LNX2Q8N448 690 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 IQCF1Q8N6M8 205 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 KBTBD8Q8NFY9 601 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 OR6N1Q8NGY5 312 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 AKAP1Q92667 903 aaKnown RBP eCLIP12.8□□□□□ -0.36
VPS16-205ENST00000453689 HDAC2Q92769 488 aaKnown RBP12.8□□□□□ -0.36
VPS16-205ENST00000453689 NEUROG1Q92886 237 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 TMEM54Q969K7 222 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 KCNK17Q96T54 332 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 FOXC2Q99958 501 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 MRPL13Q9BYD1 178 aaKnown RBP12.8□□□□□ -0.36
VPS16-205ENST00000453689 RIBC2Q9H4K1 309 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 B3GAT2Q9NPZ5 323 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 GLTPQ9NZD2 209 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
VPS16-205ENST00000453689 A0A096LPE4 126 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 ARPC4-TTLL3A0A0A6YYG9 625 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 A0A1W2PPZ6 126 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 ZNF99A8MXY4 864 aaPredicted RBP12.79□□□□□ -0.36
VPS16-205ENST00000453689 SHISA9B4DS77 424 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 M0R1B8 84 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 ABCD4O14678 606 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 AHCYL1O43865 530 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 WNT11O96014 354 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 CD40P25942 277 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 GIPRP48546 466 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 CDK5Q00535 292 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 MYBPC1Q00872 1141 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 SPOCK1Q08629 439 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 CD47Q08722 323 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 NPRL3Q12980 569 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 DEFB113Q30KQ7 82 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 TMEM108Q6UXF1 575 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 JAZF1Q86VZ6 243 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 FNDC8Q8TC99 324 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 RDH12Q96NR8 316 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 SNX18Q96RF0 628 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 CCL19Q99731 98 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 TEX12Q9BXU0 123 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 CXXC4Q9H2H0 198 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 VCXQ9H320 206 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 OBP2BQ9NPH6 170 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 PLCE1Q9P212 2302 aa12.79□□□□□ -0.36
VPS16-205ENST00000453689 PRSS37A4D1T9 235 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 ZAR1LA6NP61 321 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 SEC14L2O76054 403 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 IFNGP01579 166 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 HIST1H1CP16403 213 aaKnown RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 PTAFRP25105 342 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 UBE2NP61088 152 aaKnown RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 TUBA1BP68363 451 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 TUBA4AP68366 448 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 PTGES3Q15185 160 aaKnown RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 HIST3H3Q16695 136 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 SLC35F1Q5T1Q4 408 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 SLX4IPQ5VYV7 408 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 ACSM5Q6NUN0 579 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 LEG1Q6P5S2 330 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 TUBA1AQ71U36 451 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 LURAP1LQ8IV03 231 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 GALNT4Q8N4A0 578 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 SYT14Q8NB59 555 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 SDR9C7Q8NEX9 313 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 OR4K13Q8NH42 304 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 FBXW5Q969U6 566 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 NMD3Q96D46 503 aaKnown RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 PRRG3Q9BZD7 231 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 TOR3AQ9H497 397 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 CMC2Q9NRP2 79 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 SMPD3Q9NY59 655 aaPredicted RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 VSX1Q9NZR4 365 aaPredicted RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 KLHL21Q9UJP4 597 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 ARID1AO14497 2285 aa12.78□□□□□ -0.36
VPS16-205ENST00000453689 CHD3Q12873 2000 aaKnown RBP12.78□□□□□ -0.36
VPS16-205ENST00000453689 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.37
VPS16-205ENST00000453689 RIIAD1A6NNX1 92 aa12.77□□□□□ -0.37
VPS16-205ENST00000453689 H7C1C5 153 aa12.77□□□□□ -0.37
VPS16-205ENST00000453689 RENP00797 406 aa12.77□□□□□ -0.37
VPS16-205ENST00000453689 HMGN1P05114 100 aa12.77□□□□□ -0.37
VPS16-205ENST00000453689 QDPRP09417 244 aa12.77□□□□□ -0.37
VPS16-205ENST00000453689 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms