RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SNAP29O95721 258 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 TACSTD2P09758 323 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 LYNX1P0DP58 116 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 CCNOP22674 350 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 IGFBP5P24593 272 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 CDAP32320 146 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 GUCA1AP43080 201 aaPredicted RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 SEC24CP53992 1094 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 CTXN1P60606 82 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 RPL27P61353 136 aaKnown RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 GNGT1P63211 74 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 MRPS34P82930 218 aaKnown RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 RIN1Q13671 783 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 MAD2L1BPQ15013 274 aaPredicted RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 SGCAQ16586 387 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 IFI44LQ53G44 452 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 NRMQ8IXM6 262 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 OFCC1Q8IZS5 231 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 ICA1LQ8NDH6 482 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 FNDC8Q8TC99 324 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 C11orf40Q8WZ69 217 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 HDAC2Q92769 488 aaKnown RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 SNX18Q96RF0 628 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 BCL2L14Q9BZR8 327 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 MYEF2Q9P2K5 600 aaKnown RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 GMPR2Q9P2T1 348 aaKnown RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 SNX13Q9Y5W8 968 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 EFCAB9A8MZ26 197 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 J3KTA2 159 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 NME4O00746 187 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 HPXP02790 462 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 MMP7P09237 267 aaPredicted RBP11.06□□□□□ -0.64
CHD3-206ENST00000452447 NAT2P11245 290 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 SRD5A1P18405 259 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 APEX1P27695 318 aaKnown RBP11.06□□□□□ -0.64
CHD3-206ENST00000452447 NUDT2P50583 147 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 UCP2P55851 309 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 KLF3P57682 345 aaPredicted RBP11.06□□□□□ -0.64
CHD3-206ENST00000452447 FMODQ06828 376 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 ANKDD1AQ495B1 522 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 PABPC1L2AQ5JQF8 200 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 FAM120AOSQ5T036 256 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 THEM4Q5T1C6 240 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 UGT2A3Q6UWM9 527 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 ZNF730Q6ZMV8 503 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 RRM2BQ7LG56 351 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 OAFQ86UD1 273 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 RNF113BQ8IZP6 322 aaKnown RBP11.06□□□□□ -0.64
CHD3-206ENST00000452447 PAQR4Q8N4S7 273 aaPredicted RBP11.06□□□□□ -0.64
CHD3-206ENST00000452447 OR51A7Q8NH64 312 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 ZNF519Q8TB69 540 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 SYNPRQ8TBG9 265 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 RDH5Q92781 318 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 HPS1Q92902 700 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 FAM162AQ96A26 154 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 HSH2DQ96JZ2 352 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 ALG12Q9BV10 488 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 TAAR3PQ9P1P4 343 aa11.06□□□□□ -0.64
CHD3-206ENST00000452447 TRAV27A0A087WT01 109 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 FFAR1O14842 300 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 SERPINA1P01009 418 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 ZNF32P17041 273 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 MAKP20794 623 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 ACHEP22303 614 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 STOMP27105 288 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 SLC9A3P48764 834 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 GSK3BP49841 420 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 PRKCDQ05655 676 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 TRIP10Q15642 601 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 ELFN2Q5R3F8 820 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 FAM205BPQ63HN1 556 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 TMEM154Q6P9G4 183 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 UNQ6126/PRO20091Q6UXV3 157 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 CBLL1Q75N03 491 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 IGFN1Q86VF2 1251 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 CYP4Z1Q86W10 505 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 MEX3DQ86XN8 651 aaKnown RBP11.05□□□□□ -0.64
CHD3-206ENST00000452447 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 ACOT11Q8WXI4 607 aaPredicted RBP11.05□□□□□ -0.64
CHD3-206ENST00000452447 CMTM5Q96DZ9 223 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 KCTD14Q9BQ13 255 aaPredicted RBP11.05□□□□□ -0.64
CHD3-206ENST00000452447 SOX7Q9BT81 388 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 MAN2C1Q9NTJ4 1040 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 SLCO1C1Q9NYB5 712 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 EIF3KQ9UBQ5 218 aaKnown RBP11.05□□□□□ -0.64
CHD3-206ENST00000452447 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
CHD3-206ENST00000452447 IGKV1D-43A0A0B4J1Z2 117 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 A6NIZ1 184 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 CLPTM1O96005 669 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 IGHMP01871 453 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 MT-ND5P03915 603 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 ZNF250P15622 560 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 DRD4P21917 467 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 COL8A2P25067 703 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 IL2RGP31785 369 aa11.04□□□□□ -0.64
CHD3-206ENST00000452447 RPL4P36578 427 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms