RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 GIPC3Q8TF64 312 aa17.34■□□□□ 0.37
COL9A3-202ENST00000452372 PIGTQ969N2 578 aa17.34■□□□□ 0.37
COL9A3-202ENST00000452372 FBXW5Q969U6 566 aa17.34■□□□□ 0.37
COL9A3-202ENST00000452372 RASD2Q96D21 266 aa17.34■□□□□ 0.37
COL9A3-202ENST00000452372 ERMAPQ96PL5 475 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-202ENST00000452372 SIAEQ9HAT2 523 aa17.34■□□□□ 0.37
COL9A3-202ENST00000452372 IL20Q9NYY1 176 aa17.34■□□□□ 0.37
COL9A3-202ENST00000452372 H7C1C5 153 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 PPP1R3DO95685 299 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 CECR9P0C854 216 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 NPR2P20594 1047 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 GSTM3P21266 225 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 CDH11P55287 796 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 LCN6P62502 163 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 NKX6-1P78426 367 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-202ENST00000452372 RASSF6Q6ZTQ3 369 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 DPPA2Q7Z7J5 298 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 TMEM179BQ7Z7N9 219 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 ADCK1Q86TW2 530 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 OR10G2Q8NGC3 310 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 FGFBP3Q8TAT2 258 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 IGFBPL1Q8WX77 278 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 NSMAFQ92636 917 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 HTRA1Q92743 480 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 UTP4Q969X6 686 aaKnown RBP17.33■□□□□ 0.36
COL9A3-202ENST00000452372 ZNF75AQ96N20 296 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 SH3GL3Q99963 347 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 IFT27Q9BW83 186 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 NOX3Q9HBY0 568 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 VSX1Q9NZR4 365 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-202ENST00000452372 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-202ENST00000452372 MOKQ9UQ07 419 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 CDH10Q9Y6N8 788 aa17.33■□□□□ 0.36
COL9A3-202ENST00000452372 ARRDC5A6NEK1 342 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 E7EQL1 145 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 SOCS2O14508 198 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 IDH3BO43837 385 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CIB2O75838 187 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CRYAAP02489 173 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CELA3BP08861 270 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 DANCRP0C864 163 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CDAP32320 146 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 GIPRP48546 466 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 IDH3GP51553 393 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-202ENST00000452372 NAAAQ02083 359 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CCNIQ14094 377 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CD300LDQ6UXZ3 194 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 SLC16A14Q7RTX9 510 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 MYPOPQ86VE0 399 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-202ENST00000452372 IL17RDQ8NFM7 739 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 SMAP2Q8WU79 429 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-202ENST00000452372 GTPBP3Q969Y2 492 aaKnown RBP17.32■□□□□ 0.36
COL9A3-202ENST00000452372 NABP1Q96AH0 204 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 DUS3LQ96G46 650 aaKnown RBP17.32■□□□□ 0.36
COL9A3-202ENST00000452372 FEVQ99581 238 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 CCL19Q99731 98 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 KCNS3Q9BQ31 491 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 EGLN3Q9H6Z9 239 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 SEC61A2Q9H9S3 476 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 POU2F3Q9UKI9 436 aa17.32■□□□□ 0.36
COL9A3-202ENST00000452372 ATP6V1G2-DDX39BF2Z307 99 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 E2F6O75461 281 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 PATE4P0C8F1 98 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 ZNF14P17017 642 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-202ENST00000452372 CDKN2AP42771 156 aaKnown RBP17.31■□□□□ 0.36
COL9A3-202ENST00000452372 PTDSS1P48651 473 aaKnown RBP17.31■□□□□ 0.36
COL9A3-202ENST00000452372 COX10Q12887 443 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 NPRL3Q12980 569 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 SGCAQ16586 387 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 SLC36A2Q495M3 483 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 FAM27BQ5VT28 67 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 SHEQ5VZ18 495 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 FOXL2NBQ6ZUU3 175 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 PTCHD4Q6ZW05 846 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 C18orf12Q96KH6 178 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 SYT4Q9H2B2 425 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 ARMC1Q9NVT9 282 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 PDP1Q9P0J1 537 aaPredicted RBP17.31■□□□□ 0.36
COL9A3-202ENST00000452372 FBXL3Q9UKT7 428 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 ATP23Q9Y6H3 246 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 RTTNQ86VV8 2226 aa17.31■□□□□ 0.36
COL9A3-202ENST00000452372 TMCC2O75069 709 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 DEAF1O75398 565 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-202ENST00000452372 TIPRLO75663 272 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 RAB36O95755 333 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 CTLA4P16410 223 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 GUCA1AP43080 201 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-202ENST00000452372 ETFDHQ16134 617 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 PGGHGQ32M88 737 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 TMEM53Q6P2H8 277 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 B3GLCTQ6Y288 498 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 BIVMQ86UB2 503 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 LRRC18Q8N456 261 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 OR52L1Q8NGH7 329 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 SNX18Q96RF0 628 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 NIPSNAP1Q9BPW8 284 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 DHRS9Q9BPW9 319 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 PLA2G12AQ9BZM1 189 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 KCNN2Q9H2S1 579 aa17.3■□□□□ 0.36
COL9A3-202ENST00000452372 NTN4Q9HB63 628 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms