RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 WNK2Q9Y3S1 2297 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 CENPBD1B2RD01 187 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 PIP5K1CO60331 668 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 VENTXO95231 258 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 ZNF133P52736 654 aaPredicted RBP24.12■■□□□ 1.45
CBX4-202ENST00000448310 LAPTM4AQ15012 233 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 METTL21CQ5VZV1 264 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 THSD4Q6ZMP0 1018 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 OR1J1Q8NGS3 322 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 NSMAFQ92636 917 aa24.12■■□□□ 1.45
CBX4-202ENST00000448310 ZNF32P17041 273 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 SF3A3Q12874 501 aaKnown RBP eCLIP24.11■■□□□ 1.453e-6■■■■■ 27.2
CBX4-202ENST00000448310 TSTQ16762 297 aaKnown RBP24.11■■□□□ 1.45
CBX4-202ENST00000448310 PCGF3Q3KNV8 242 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 HDDC2Q7Z4H3 204 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 OR8J3Q8NGG0 315 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 NABP1Q96AH0 204 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 NMD3Q96D46 503 aaKnown RBP24.11■■□□□ 1.45
CBX4-202ENST00000448310 SH3GL1Q99961 368 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 SIAEQ9HAT2 523 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 CCNB1IP1Q9NPC3 277 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 MED31Q9Y3C7 131 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 CACNG2Q9Y698 323 aa24.11■■□□□ 1.45
CBX4-202ENST00000448310 TPD52L2O43399 206 aaKnown RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 RGS9O75916 674 aaPredicted RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 TSPAN19P0C672 248 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 DRD4P21917 467 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 MRPS34P82930 218 aaKnown RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 CD47Q08722 323 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 TOP3AQ13472 1001 aaPredicted RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 SGCAQ16586 387 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 MMEL1Q495T6 779 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 SPATA46Q5T0L3 261 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 FAHD2BQ6P2I3 314 aaPredicted RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 SHQ1Q6PI26 577 aaKnown RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 USP51Q70EK9 711 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 ZNF101Q8IZC7 436 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 AKR7LQ8NHP1 331 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 LIPHQ8WWY8 451 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 FAHD2AQ96GK7 314 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 ZNF583Q96ND8 569 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 POLR2J2Q9GZM3 115 aaKnown RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 POLR2J3Q9H1A7 115 aaKnown RBP24.1■■□□□ 1.45
CBX4-202ENST00000448310 KCNN2Q9H2S1 579 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 NKIRAS2Q9NYR9 191 aa24.1■■□□□ 1.45
CBX4-202ENST00000448310 IGHV1-69-2A0A0G2JMI3 117 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 MRASO14807 208 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 MGRN1O60291 552 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 IGF2P01344 180 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 STOMP27105 288 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 WNT5AP41221 380 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 CRYBB2P43320 205 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 LRRC23Q53EV4 343 aaPredicted RBP24.09■■□□□ 1.45
CBX4-202ENST00000448310 TMEM255AQ5JRV8 349 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 HDXQ7Z353 690 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 MEX3DQ86XN8 651 aaKnown RBP24.09■■□□□ 1.45
CBX4-202ENST00000448310 CLDN22Q8N7P3 220 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 C10orf82Q8WW14 230 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 ZNF665Q9H7R5 613 aa24.09■■□□□ 1.45
CBX4-202ENST00000448310 IGHV3-13P01766 116 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 ERVK-25P63136 954 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 CYBRD1Q53TN4 286 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 ERICH5Q6P6B1 374 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 POM121L2Q96KW2 1035 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 TXNIPQ9H3M7 391 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 DECR2Q9NUI1 292 aa24.08■■□□□ 1.45
CBX4-202ENST00000448310 STX18Q9P2W9 335 aaKnown RBP24.08■■□□□ 1.45
CBX4-202ENST00000448310 ARHGAP32A7KAX9 2087 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 LOC100509620A0A075B734 347 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 TRAV20A0A0B4J274 112 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 FUT4P22083 530 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 MPV17P39210 176 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 KLF10Q13118 480 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 ALG10Q5BKT4 473 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 SLC25A47Q6Q0C1 308 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 C1orf229Q6ZS94 237 aaPredicted RBP24.07■■□□□ 1.44
CBX4-202ENST00000448310 IGFN1Q86VF2 1251 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 SEMA6DQ8NFY4 1073 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 TPD52L3Q96J77 140 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 SAP30LQ9HAJ7 183 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 SMURF2Q9HAU4 748 aa24.07■■□□□ 1.44
CBX4-202ENST00000448310 TENM1Q9UKZ4 2725 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 C5orf49A4QMS7 147 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 SPRY3O43610 288 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 PNPP00491 289 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 AVPP01185 164 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 IFNA14P01570 189 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 MT-ND5P03915 603 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 THRBP10828 461 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 ZNF81P51508 661 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 PSG4Q00888 419 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 TEKQ02763 1124 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 THEM4Q5T1C6 240 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 SLC25A40Q8TBP6 338 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 IPCEF1Q8WWN9 437 aaPredicted RBP24.06■■□□□ 1.44
CBX4-202ENST00000448310 G6PC2Q9NQR9 355 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 HIF3AQ9Y2N7 669 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 WIPI2Q9Y4P8 454 aa24.06■■□□□ 1.44
CBX4-202ENST00000448310 LOC105371242A0A075B767 164 aa24.05■■□□□ 1.44
CBX4-202ENST00000448310 NPIPB13A6NJU9 1138 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms