RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 APOBP04114 4563 aaKnown RBP2.6□□□□□ -1.99
PMS1-215ENST00000447232 NKX6-3A6NJ46 265 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 LIPT2A6NK58 231 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 LDLRAD4O15165 306 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 SCAF4O95104 1147 aaKnown RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 UBL3O95164 117 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 VAMP5O95183 116 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 ABHD16AO95870 558 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 S100BP04271 92 aaPredicted RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 DDCP20711 480 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 SAA4P35542 130 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 NPY4RP50391 375 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 ARF6P62330 175 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 POU6F2P78424 691 aaPredicted RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.59□□□□□ -1.99
PMS1-215ENST00000447232 PHYHD1Q5SRE7 291 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 IL23RQ5VWK5 629 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CDC73Q6P1J9 531 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 LYPD2Q6UXB3 125 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 VMO1Q7Z5L0 202 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 PNLDC1Q8NA58 520 aaKnown RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 FAM71CQ8NEG0 241 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 SLC30A7Q8NEW0 376 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 FGFBP3Q8TAT2 258 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 PIFOQ8TCI5 191 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 PMM1Q92871 262 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 EXT2Q93063 718 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TUBGCP3Q96CW5 907 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 UBXN10Q96LJ8 280 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 OR5M11Q96RB7 305 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CPPED1Q9BRF8 314 aaPredicted RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 FAM234AQ9H0X4 552 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 OR51B6Q9H340 312 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 BRF2Q9HAW0 419 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 DUSP22Q9NRW4 184 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 FARSBQ9NSD9 589 aaKnown RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 GIN1Q9NXP7 522 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 PSAT1Q9Y617 370 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 KPTNQ9Y664 436 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 A0A1B0GVI7 797 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TMEM72A0PK05 275 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 UBXN8O00124 270 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 OR7A17O14581 309 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 SLC22A3O75751 556 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 PAHP00439 452 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 HCKP08631 526 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CCL2P13500 99 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TSPAN8P19075 237 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CRATP43155 626 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 MTNR1BP49286 362 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CEACAM7Q14002 265 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 NPTX1Q15818 432 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 STX1AQ16623 288 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 LRRC75BQ2VPJ9 315 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TMEM95Q3KNT9 176 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CDONQ4KMG0 1287 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 SPANXN3Q5MJ09 141 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 AP1ARQ63HQ0 302 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 ZCCHC12Q6PEW1 402 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 ZNF813Q6ZN06 617 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 DCDC5Q6ZRR9 648 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 GOLGA7Q7Z5G4 137 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 ISCA2Q86U28 154 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 IGFN1Q86VF2 1251 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TMEM123Q8N131 208 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 GPR137CQ8N3F9 429 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 COX18Q8N8Q8 333 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 OR1J1Q8NGS3 322 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 C16orf78Q8WTQ4 265 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TNFRSF14Q92956 283 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 DDIT4LQ96D03 193 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 OTUB1Q96FW1 271 aaPredicted RBP2.59□□□□□ -1.99
PMS1-215ENST00000447232 MS4A4EQ96PG1 132 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 STACQ99469 402 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 SLC19A3Q9BZV2 496 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 CTSZQ9UBR2 303 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 RNF14Q9UBS8 474 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 IL19Q9UHD0 177 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 KCNE5Q9UJ90 142 aa2.59□□□□□ -1.99
PMS1-215ENST00000447232 TMED7-TICAM2A0A0A6YYA0 188 aa2.58□□□□□ -2
PMS1-215ENST00000447232 IFNL4K9M1U5 179 aa2.58□□□□□ -2
PMS1-215ENST00000447232 F2RL2O00254 374 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PPP6CO00743 305 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PCDH7O60245 1069 aa2.58□□□□□ -2
PMS1-215ENST00000447232 BCAS1O75363 584 aaPredicted RBP2.58□□□□□ -2
PMS1-215ENST00000447232 PEX14O75381 377 aa2.58□□□□□ -2
PMS1-215ENST00000447232 FCN3O75636 299 aa2.58□□□□□ -2
PMS1-215ENST00000447232 LY86O95711 162 aa2.58□□□□□ -2
PMS1-215ENST00000447232 OTCP00480 354 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PDYNP01213 254 aa2.58□□□□□ -2
PMS1-215ENST00000447232 GPIP06744 558 aa2.58□□□□□ -2
PMS1-215ENST00000447232 PATE4P0C8F1 98 aa2.58□□□□□ -2
PMS1-215ENST00000447232 B4GALT1P15291 398 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CCNA2P20248 432 aa2.58□□□□□ -2
PMS1-215ENST00000447232 ATP6V1C1P21283 382 aa2.58□□□□□ -2
PMS1-215ENST00000447232 CNTFRP26992 372 aa2.58□□□□□ -2
PMS1-215ENST00000447232 TACR3P29371 465 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MYCNOSP40205 109 aa2.58□□□□□ -2
PMS1-215ENST00000447232 MAP2K6P52564 334 aa2.58□□□□□ -2
PMS1-215ENST00000447232 TERF1P54274 439 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms