RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PARP4Q9UKK3 1724 aaKnown RBP7.24□□□□□ -1.25
SMG1-202ENST00000446231 GDF6Q6KF10 455 aaPredicted RBP7.24□□□□□ -1.25
SMG1-202ENST00000446231 APCDD1Q8J025 514 aa7.24□□□□□ -1.25
SMG1-202ENST00000446231 GOT1L1Q8NHS2 421 aaPredicted RBP7.24□□□□□ -1.25
SMG1-202ENST00000446231 CPNE4Q96A23 557 aaPredicted RBP7.24□□□□□ -1.25
SMG1-202ENST00000446231 SOHLH2Q9NX45 425 aa7.24□□□□□ -1.25
SMG1-202ENST00000446231 ZNF586Q9NXT0 402 aa7.24□□□□□ -1.25
SMG1-202ENST00000446231 V9GYS6 101 aa7.24□□□□□ -1.25
SMG1-202ENST00000446231 PIK3C2AO00443 1686 aa7.24□□□□□ -1.25
SMG1-202ENST00000446231 RAB11AP62491 216 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 KCNG3Q8TAE7 436 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 DNAJA3Q96EY1 480 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 POM121Q96HA1 1249 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 PAAF1Q9BRP4 392 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 LEFTY2O00292 366 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ATP1B3P54709 279 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 GUK1Q16774 197 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 FIP1L1Q6UN15 594 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 DERL3Q96Q80 235 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 TXN2Q99757 166 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 MACROD1Q9BQ69 325 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 RASL12Q9NYN1 266 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CA14Q9ULX7 337 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 A0A0U1RQK1 487 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 RAB28P51157 221 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CTSCP53634 463 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SUMO1P63165 101 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 TMEM123Q8N131 208 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 TMEM18Q96B42 140 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 NUDT21O43809 227 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 NHLRC3Q5JS37 347 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 PRSS16Q9NQE7 514 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 C7orf66A4D0T2 115 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 PDGFBP01127 241 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 CD37P11049 281 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 EPHA1P21709 976 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HSD11B2P80365 405 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CDK5R1Q15078 307 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ZNF660Q6AZW8 331 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 DHRS7BQ6IAN0 325 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 TRBV23-1A0A0A0MS06 115 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CTSEP14091 401 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CSNK1DP48730 415 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 PCBP4P57723 403 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 YBX1P67809 324 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 CDK5Q00535 292 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ADIRFQ15847 76 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 OR14C36Q8NHC7 312 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SERINC1Q9NRX5 453 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 LAMB4A4D0S4 1761 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 DUSP11O75319 330 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 ITGB2P05107 769 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 OGFOD3Q6PK18 319 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 FAM181AQ8N9Y4 354 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 OR51Q1Q8NH59 317 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ADAM19Q9H013 955 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 TAS2R4Q9NYW5 299 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 RNF224P0DH78 156 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ARRB1P49407 418 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 EMP2P54851 167 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 PMPCAQ10713 525 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HNF4GQ14541 408 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 MRPL2Q5T653 305 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 MOB3CQ70IA8 216 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SIGLECL1Q8N7X8 197 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SAT2Q96F10 170 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 FER1L6Q2WGJ9 1857 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 C7orf77A4D0Y5 90 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HHLA1C9JL84 531 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 M0QZK8 103 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 GGCTO75223 188 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 CSNK1EP49674 416 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 LIM2P55344 173 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 TIAL1Q01085 375 aaKnown RBP eCLIP7.23□□□□□ -1.256e-7■□□□□ 9.7
SMG1-202ENST00000446231 SDR9C7Q8NEX9 313 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 OR5D14Q8NGL3 314 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 GDF2Q9UK05 429 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 NTNG1Q9Y2I2 539 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 SLC16A7O60669 478 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CXCL14O95715 111 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 F2P00734 622 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HRH1P35367 487 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CMTM8Q8IZV2 173 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 FIBINQ8TAL6 211 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 RBM14Q96PK6 669 aaKnown RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 ZCCHC4Q9H5U6 513 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CMC2Q9NRP2 79 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 ST8SIA5O15466 376 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 RFLNAQ6ZTI6 216 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 PPP1R3BQ86XI6 285 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 RXFP4Q8TDU9 374 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CCDC187A0A096LP49 1063 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.23□□□□□ -1.25
SMG1-202ENST00000446231 VEGFDO43915 354 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 TBPP20226 339 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 FAM24BQ8N5W8 94 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 CERS4Q9HA82 394 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 GNG13Q9P2W3 67 aa7.23□□□□□ -1.25
SMG1-202ENST00000446231 OR5V1Q9UGF6 321 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms