RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 DTX3Q8N9I9 347 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 SLC30A7Q8NEW0 376 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 SPATA4Q8NEY3 305 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 OR6N1Q8NGY5 312 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 MFSD8Q8NHS3 518 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 ACMSDQ8TDX5 336 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 STON2Q8WXE9 905 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
CBX1-204ENST00000444685 DYRK2Q92630 601 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 TAF15Q92804 592 aaKnown RBP eCLIP4.33□□□□□ -1.72
CBX1-204ENST00000444685 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 NEURL3Q96EH8 262 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 THOC1Q96FV9 657 aaKnown RBP4.33□□□□□ -1.72
CBX1-204ENST00000444685 KIRREL1Q96J84 757 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 PLEKHA8Q96JA3 519 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 LRR1Q96L50 414 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 MAGEB18Q96M61 343 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 C1orf147Q96MC9 270 aaPredicted RBP4.33□□□□□ -1.72
CBX1-204ENST00000444685 ZNF48Q96MX3 618 aaPredicted RBP4.33□□□□□ -1.72
CBX1-204ENST00000444685 KCNN2Q9H2S1 579 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 OR51B6Q9H340 312 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 GSTO2Q9H4Y5 243 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 MMP26Q9NRE1 261 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 C1RLQ9NZP8 487 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 MYEF2Q9P2K5 600 aaKnown RBP4.33□□□□□ -1.72
CBX1-204ENST00000444685 RPS6KB2Q9UBS0 482 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 ZDHHC8Q9ULC8 765 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 NPTNQ9Y639 398 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 POMT1Q9Y6A1 747 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 PRKDCP78527 4128 aaKnown RBP4.33□□□□□ -1.72
CBX1-204ENST00000444685 DOCK11Q5JSL3 2073 aa4.33□□□□□ -1.72
CBX1-204ENST00000444685 RNF103-CHMP3A0A140T963 221 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 LOC102725191A0A1B0GVB3 256 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 AIM2O14862 343 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 LSM1O15116 133 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 DHHO43323 396 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 XPNPEP2O43895 674 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 PEX11AO75192 247 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 CLPXO76031 633 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 CPSF4O95639 269 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 LY86O95711 162 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 IGHV3-13P01766 116 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 OR8G3PP0DMU2 310 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 NR2F1P10589 423 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 CPA3P15088 417 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 ZNF12P17014 697 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 TNFRSF1AP19438 455 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 CCNOP22674 350 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 UQCRC2P22695 453 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 APLNRP35414 380 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 RPS5P46782 204 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 SLC6A9P48067 706 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 DNAJB13P59910 316 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 TXNL4AP83876 142 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 PAX8Q06710 450 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 BST1Q10588 318 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 EPS8Q12929 822 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 MAD2L1Q13257 205 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 MFSD13AQ14CX5 517 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 CCDC153Q494R4 210 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 SLC36A2Q495M3 483 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 PDCD4Q53EL6 469 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 KLF17Q5JT82 389 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 FAM209BQ5JX69 171 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 ANXA8L1Q5VT79 327 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 RUSC1-AS1Q66K80 236 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 ATG16L1Q676U5 607 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 TNFAIP8L2Q6P589 184 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 C5orf46Q6UWT4 87 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 C6orf89Q6UWU4 347 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 ZYG11AQ6WRX3 759 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 Q6ZTK2 550 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 H1FNTQ75WM6 255 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 ZER1Q7Z7L7 766 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 LRRC28Q86X40 367 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 RNF130Q86XS8 419 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 TRIML2Q8N7C3 387 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 ANKRD42Q8N9B4 389 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 FNDC5Q8NAU1 212 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 NOA1Q8NC60 698 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 OR4A15Q8NGL6 344 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 OR10S1Q8NGN2 331 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 MIPOL1Q8TD10 442 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 SSMEM1Q8WWF3 244 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 RAB40AQ8WXH6 277 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 KTI12Q96EK9 354 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 FCRL1Q96LA6 429 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 TRNT1Q96Q11 434 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 OR2M2Q96R28 347 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 MECRQ9BV79 373 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 ULBP2Q9BZM5 246 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 DPAGT1Q9H3H5 408 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 MARCH7Q9H992 704 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 PATZ1Q9HBE1 687 aaKnown RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 NINJ2Q9NZG7 142 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 SELENONQ9NZV5 590 aa4.32□□□□□ -1.72
CBX1-204ENST00000444685 MARCOQ9UEW3 520 aaPredicted RBP4.32□□□□□ -1.72
CBX1-204ENST00000444685 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms